STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM38Tripartite motif-containing protein 38. (465 aa)    
Predicted Functional Partners:
TRIM32
E3 ubiquitin-protein ligase TRIM32.
    
 0.610
TRIM56
E3 ubiquitin-protein ligase TRIM56.
   
 
 0.609
DDX41
Putative ATP-dependent RNA helicase DDX41.
    
 0.598
TRIM23
E3 ubiquitin-protein ligase TRIM23 isoform alpha.
    
 0.573
UBE2O
Ubiquitin-conjugating enzyme E2 O.
    
 0.571
TRIM8
Putative E3 ubiquitin-protein ligase TRIM8.
    
 
 0.564
ZCCHC3
Zinc finger CCHC domain-containing protein 3.
   
 0.551
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.546
TRIM9
Tripartite motif containing 9.
   
 0.539
RNF7
Uncharacterized protein.
    
 
 0.519
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.