STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAF1Nuclear assembly factor 1 ribonucleoprotein. (514 aa)    
Predicted Functional Partners:
DKC1
Dyskerin pseudouridine synthase 1.
   
 
 0.984
TRUB1
TruB pseudouridine synthase family member 1.
   
 
 0.882
TRUB2
TruB pseudouridine synthase family member 2.
   
 
 0.853
H9KXV8_CALJA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.844
NHP2
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.844
ENSCJAP00000070775
Ribosomal_L7Ae domain-containing protein.
   
 
 0.844
ENSCJAP00000056608
Uncharacterized protein.
   
 
 0.795
NOP10
H/ACA ribonucleoprotein complex subunit 3.
   
 
 0.795
NOP10-2
H/ACA ribonucleoprotein complex subunit 3.
   
 
 0.795
ENSCJAP00000061515
Uncharacterized protein.
   
 
 0.795
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.