STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC16A11Solute carrier family 16 member 11. (471 aa)    
Predicted Functional Partners:
CCDC57
Coiled-coil domain containing 57.
   
 
 0.645
SLC6A11
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.639
EMB
Embigin.
   
 0.542
RBM11
RNA binding motif protein 11.
   
 
 0.535
ZNF521
Zinc finger protein 521.
    
 
 0.521
SLC12A1
Solute carrier family 12 member 1.
      
 0.506
BSND
Barttin CLCNK type accessory beta subunit.
      
 0.505
BSG
Basigin (Ok blood group).
    
 0.503
MXRA8
Uncharacterized protein.
      
 0.426
AMH
Anti-Mullerian hormone.
      
 0.420
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.