Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GTF2B | POLR2B | ENSCJAP00000013916 | ENSCJAP00000007614 | Transcription initiation factor IIB. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
GTF2B | POLR2C | ENSCJAP00000013916 | ENSCJAP00000022094 | Transcription initiation factor IIB. | RNA polymerase II subunit C. | 0.992 |
GTF2B | POLR2E | ENSCJAP00000013916 | ENSCJAP00000014219 | Transcription initiation factor IIB. | RNA polymerase II subunit E. | 0.994 |
GTF2B | POLR2F | ENSCJAP00000013916 | ENSCJAP00000064748 | Transcription initiation factor IIB. | Uncharacterized protein. | 0.985 |
GTF2B | POLR2G | ENSCJAP00000013916 | ENSCJAP00000034715 | Transcription initiation factor IIB. | Uncharacterized protein. | 0.961 |
GTF2B | POLR2H | ENSCJAP00000013916 | ENSCJAP00000027546 | Transcription initiation factor IIB. | RNA polymerase II subunit H. | 0.990 |
GTF2B | POLR2I | ENSCJAP00000013916 | ENSCJAP00000017724 | Transcription initiation factor IIB. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.985 |
GTF2B | POLR2J | ENSCJAP00000013916 | ENSCJAP00000029847 | Transcription initiation factor IIB. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.980 |
GTF2B | SUPT4H1 | ENSCJAP00000013916 | ENSCJAP00000031994 | Transcription initiation factor IIB. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.813 |
LEO1 | POLR2B | ENSCJAP00000001668 | ENSCJAP00000007614 | LEO1 homolog, Paf1/RNA polymerase II complex component. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
LEO1 | POLR2C | ENSCJAP00000001668 | ENSCJAP00000022094 | LEO1 homolog, Paf1/RNA polymerase II complex component. | RNA polymerase II subunit C. | 0.990 |
LEO1 | POLR2E | ENSCJAP00000001668 | ENSCJAP00000014219 | LEO1 homolog, Paf1/RNA polymerase II complex component. | RNA polymerase II subunit E. | 0.986 |
LEO1 | POLR2F | ENSCJAP00000001668 | ENSCJAP00000064748 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Uncharacterized protein. | 0.988 |
LEO1 | POLR2G | ENSCJAP00000001668 | ENSCJAP00000034715 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Uncharacterized protein. | 0.986 |
LEO1 | POLR2H | ENSCJAP00000001668 | ENSCJAP00000027546 | LEO1 homolog, Paf1/RNA polymerase II complex component. | RNA polymerase II subunit H. | 0.987 |
LEO1 | POLR2I | ENSCJAP00000001668 | ENSCJAP00000017724 | LEO1 homolog, Paf1/RNA polymerase II complex component. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.989 |
LEO1 | POLR2J | ENSCJAP00000001668 | ENSCJAP00000029847 | LEO1 homolog, Paf1/RNA polymerase II complex component. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.885 |
LEO1 | SUPT4H1 | ENSCJAP00000001668 | ENSCJAP00000031994 | LEO1 homolog, Paf1/RNA polymerase II complex component. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.996 |
POLR2B | GTF2B | ENSCJAP00000007614 | ENSCJAP00000013916 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription initiation factor IIB. | 0.995 |
POLR2B | LEO1 | ENSCJAP00000007614 | ENSCJAP00000001668 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | LEO1 homolog, Paf1/RNA polymerase II complex component. | 0.992 |
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