STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP3Low-density lipoprotein receptor-related protein 3. (770 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.664
ENSCJAP00000078263
Uncharacterized protein.
    
 0.664
APLP1
Amyloid beta precursor like protein 1.
    
 0.629
CCNE1
G1/S-specific cyclin-E1; Belongs to the cyclin family.
      
 0.563
FKRP
Fukutin-related protein.
      
 0.563
RELN
Reelin.
    
 0.521
ITSN1
Intersectin 1.
    
 0.466
AGRN
Agrin.
    
 0.466
HSPG2
Heparan sulfate proteoglycan 2.
    
0.466
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.455
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.