STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALYRNA-binding protein Raly isoform 1. (309 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1 isoform 4.
    
 
 0.802
ZNF512B
Zinc finger protein 512B.
    
 
 0.708
BBX
BBX high mobility group box domain containing.
    
 
 0.691
EIF2S2
Eukaryotic translation initiation factor 2 subunit 2.
   
 
 0.682
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform a.
   
 
0.679
ASIP
Agouti-signaling protein; Involved in the regulation of melanogenesis. The binding of ASP to MC1R precludes alpha-MSH initiated signaling and thus blocks production of cAMP, leading to a down-regulation of eumelanogenesis (brown/black pigment) and thus increasing synthesis of pheomelanin (yellow/red pigment) (By similarity).
      
 0.655
ZGPAT
Zinc finger CCCH-type with G patch domain-containing protein isoform c.
   
  
 0.624
NSUN3
NOP2/Sun RNA methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.614
F7HVQ5_CALJA
RRM domain-containing protein.
  
 
0.576
ENSCJAP00000053270
RRM domain-containing protein.
   
 
0.568
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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