STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100410611Hemoglobin subunit beta; Involved in oxygen transport from the lung to the various peripheral tissues. (147 aa)    
Predicted Functional Partners:
HBQ1_1
Theta 1 globin (Predicted); Belongs to the globin family.
  
0.969
F6RYT9_CALJA
GLOBIN domain-containing protein; Belongs to the globin family.
  
0.968
HBQ1
GLOBIN domain-containing protein; Belongs to the globin family.
   
0.966
HBM
Hemoglobin mu chain (Predicted); Belongs to the globin family.
  
0.961
HBZ
Hemoglobin subunit zeta; Belongs to the globin family.
  
0.950
AHSP
Alpha-hemoglobin-stabilizing protein.
   
 
 0.941
HP
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.924
ALAS2
5-aminolevulinate synthase.
   
  
 0.811
APOB
Apolipoprotein B.
   
 
 0.744
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
      
 0.717
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.