STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUBP3Far upstream element binding protein 3. (580 aa)    
Predicted Functional Partners:
PUF60
Poly(U) binding splicing factor 60.
   
 
 0.738
QKI
QKI, KH domain containing RNA binding.
   
 
 0.635
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.579
KHDRBS2
KH domain-containing, RNA-binding, signal transduction-associated protein 2.
   
 
 0.576
PARN
Poly(A)-specific ribonuclease PARN isoform 1.
   
 0.556
KIAA0907
KH domain containing 4, pre-mRNA splicing factor.
      
 0.552
FBP1
Fructose-bisphosphatase 1; Belongs to the FBPase class 1 family.
      
 0.541
PRRC2C
Proline rich coiled-coil 2C.
   
 
 0.532
KHDRBS3
KH domain-containing, RNA-binding, signal transduction-associated protein 3.
   
 
 0.523
HNRNPF
Heterogeneous nuclear ribonucleoprotein F.
   
 
 0.501
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.