STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN3Calpain-3; Calcium-regulated non-lysosomal thiol-protease. (821 aa)    
Predicted Functional Partners:
DYSF
Dysferlin.
      
 0.898
SGCG
Sarcoglycan gamma.
   
  
 0.778
CAST
Calpastatin.
   
 0.772
TTN
Titin.
   
 
 0.707
MYL1
Myosin light chain 1.
   
 
 0.681
TCAP
Uncharacterized protein.
   
  
 0.665
ENSMFAP00000043060
ANK_REP_REGION domain-containing protein.
   
 0.660
SGCA
Sarcoglycan alpha.
      
 0.637
SPEGNB
SPEG neighbor.
   
 
 0.623
CAPNS1-2
Uncharacterized protein.
   
0.584
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.