Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX58 | ENSMFAP00000011880 | ENSMFAP00000028638 | ENSMFAP00000011880 | DExD/H-box helicase 58. | Ubiquitin-like domain-containing protein. | 0.728 |
DDX58 | IFIH1 | ENSMFAP00000028638 | ENSMFAP00000034733 | DExD/H-box helicase 58. | Interferon induced with helicase C domain 1. | 0.879 |
DDX58 | KXD1 | ENSMFAP00000028638 | ENSMFAP00000027128 | DExD/H-box helicase 58. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.822 |
DDX58 | TRIM25 | ENSMFAP00000028638 | ENSMFAP00000035225 | DExD/H-box helicase 58. | Tripartite motif containing 25. | 0.996 |
DDX58 | UBB | ENSMFAP00000028638 | ENSMFAP00000040895 | DExD/H-box helicase 58. | Uncharacterized protein. | 0.888 |
DDX58 | UBE2L6 | ENSMFAP00000028638 | ENSMFAP00000005227 | DExD/H-box helicase 58. | Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. | 0.656 |
ENSMFAP00000011880 | DDX58 | ENSMFAP00000011880 | ENSMFAP00000028638 | Ubiquitin-like domain-containing protein. | DExD/H-box helicase 58. | 0.728 |
ENSMFAP00000011880 | ENSMFAP00000014022 | ENSMFAP00000011880 | ENSMFAP00000014022 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.667 |
ENSMFAP00000011880 | IFIH1 | ENSMFAP00000011880 | ENSMFAP00000034733 | Ubiquitin-like domain-containing protein. | Interferon induced with helicase C domain 1. | 0.728 |
ENSMFAP00000011880 | LOC102124821 | ENSMFAP00000011880 | ENSMFAP00000010689 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.667 |
ENSMFAP00000011880 | LOC102136325 | ENSMFAP00000011880 | ENSMFAP00000013229 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.667 |
ENSMFAP00000011880 | TRIM25 | ENSMFAP00000011880 | ENSMFAP00000035225 | Ubiquitin-like domain-containing protein. | Tripartite motif containing 25. | 0.735 |
ENSMFAP00000011880 | UBB | ENSMFAP00000011880 | ENSMFAP00000040895 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.932 |
ENSMFAP00000011880 | UBE2L6 | ENSMFAP00000011880 | ENSMFAP00000005227 | Ubiquitin-like domain-containing protein. | Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. | 0.773 |
ENSMFAP00000011880 | UBE2NL | ENSMFAP00000011880 | ENSMFAP00000014094 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.667 |
ENSMFAP00000014022 | ENSMFAP00000011880 | ENSMFAP00000014022 | ENSMFAP00000011880 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.667 |
ENSMFAP00000014022 | KXD1 | ENSMFAP00000014022 | ENSMFAP00000027128 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-60S ribosomal protein L40; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be in [...] | 0.688 |
ENSMFAP00000014022 | TRIM25 | ENSMFAP00000014022 | ENSMFAP00000035225 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Tripartite motif containing 25. | 0.685 |
ENSMFAP00000014022 | UBB | ENSMFAP00000014022 | ENSMFAP00000040895 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Uncharacterized protein. | 0.805 |
IFIH1 | DDX58 | ENSMFAP00000034733 | ENSMFAP00000028638 | Interferon induced with helicase C domain 1. | DExD/H-box helicase 58. | 0.879 |
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