Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF6 | ENSMMUP00000041819 | ENSMMUP00000053761 | ENSMMUP00000041819 | Cleavage and polyadenylation specific factor 6. | Uncharacterized protein. | 0.681 |
CPSF6 | NUP153 | ENSMMUP00000053761 | ENSMMUP00000002669 | Cleavage and polyadenylation specific factor 6. | Uncharacterized protein. | 0.943 |
CPSF6 | RANBP2 | ENSMMUP00000053761 | ENSMMUP00000045768 | Cleavage and polyadenylation specific factor 6. | RAN binding protein 2. | 0.647 |
CPSF6 | SRSF1 | ENSMMUP00000053761 | ENSMMUP00000006280 | Cleavage and polyadenylation specific factor 6. | Uncharacterized protein. | 0.753 |
CPSF6 | TNPO1 | ENSMMUP00000053761 | ENSMMUP00000050141 | Cleavage and polyadenylation specific factor 6. | Transportin-1 isoform 1. | 0.585 |
CPSF6 | TNPO3 | ENSMMUP00000053761 | ENSMMUP00000044587 | Cleavage and polyadenylation specific factor 6. | Transportin-3 isoform 1. | 0.888 |
CPSF6 | TRIM5 | ENSMMUP00000053761 | ENSMMUP00000050746 | Cleavage and polyadenylation specific factor 6. | Tripartite motif-containing protein 5; Capsid-specific restriction factor that prevents infection from non-host-adapted retroviruses. Blocks viral replication early in the life cycle, after viral entry but before reverse transcription. In addition to acting as a capsid-specific restriction factor, also acts as a pattern recognition receptor that activates innate immune signaling in response to the retroviral capsid lattice. Binding to the viral capsid triggers its E3 ubiquitin ligase activity, and in concert with the heterodimeric ubiquitin conjugating enzyme complex UBE2V1- UBE2N (als [...] | 0.789 |
ENSMMUP00000041819 | CPSF6 | ENSMMUP00000041819 | ENSMMUP00000053761 | Uncharacterized protein. | Cleavage and polyadenylation specific factor 6. | 0.681 |
ENSMMUP00000041819 | TNPO3 | ENSMMUP00000041819 | ENSMMUP00000044587 | Uncharacterized protein. | Transportin-3 isoform 1. | 0.907 |
IPO11 | IPO7 | ENSMMUP00000034634 | ENSMMUP00000074051 | Importin 11. | Importin-7. | 0.539 |
IPO11 | RAN | ENSMMUP00000034634 | ENSMMUP00000071009 | Importin 11. | GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.493 |
IPO11 | TNPO1 | ENSMMUP00000034634 | ENSMMUP00000050141 | Importin 11. | Transportin-1 isoform 1. | 0.431 |
IPO11 | TNPO3 | ENSMMUP00000034634 | ENSMMUP00000044587 | Importin 11. | Transportin-3 isoform 1. | 0.810 |
IPO7 | IPO11 | ENSMMUP00000074051 | ENSMMUP00000034634 | Importin-7. | Importin 11. | 0.539 |
IPO7 | NUP153 | ENSMMUP00000074051 | ENSMMUP00000002669 | Importin-7. | Uncharacterized protein. | 0.887 |
IPO7 | RAN | ENSMMUP00000074051 | ENSMMUP00000071009 | Importin-7. | GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.806 |
IPO7 | RANBP2 | ENSMMUP00000074051 | ENSMMUP00000045768 | Importin-7. | RAN binding protein 2. | 0.912 |
IPO7 | TNPO1 | ENSMMUP00000074051 | ENSMMUP00000050141 | Importin-7. | Transportin-1 isoform 1. | 0.720 |
IPO7 | TNPO3 | ENSMMUP00000074051 | ENSMMUP00000044587 | Importin-7. | Transportin-3 isoform 1. | 0.831 |
NUP153 | CPSF6 | ENSMMUP00000002669 | ENSMMUP00000053761 | Uncharacterized protein. | Cleavage and polyadenylation specific factor 6. | 0.943 |
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