STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF115E3 ubiquitin-protein ligase RNF115. (304 aa)    
Predicted Functional Partners:
BAG6
BCL2 associated athanogene 6.
   
 
 0.782
UBA52
Ubiquitin-60S ribosomal protein L40.
    
 0.628
UBXN1
UBX domain protein 1.
   
 
 0.569
RSPO1
R-spondin 1.
   
 0.552
GET4
Golgi to ER traffic protein 4.
   
 
 0.539
FAF1
FAS-associated factor 1.
   
 
 0.532
TRAFD1
TRAF-type zinc finger domain-containing protein 1.
   
 
 0.526
PLAA
Phospholipase A-2-activating protein.
   
  
 0.523
NSFL1C
Uncharacterized protein.
   
 
 0.520
LGR4
Leucine-rich repeat-containing G-protein coupled receptor 4.
    
 0.515
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.