STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC90BCoiled-coil domain containing 90B. (305 aa)    
Predicted Functional Partners:
FAM32A
Family with sequence similarity 32 member A.
   
  
 0.644
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
      
 0.590
ANKRD42
Ankyrin repeat domain 42.
      
 0.580
MRPL53
Mitochondrial ribosomal protein L53.
      
 0.543
TRMT1L
TRMT1-like protein isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
  
 0.521
TMX1
Thioredoxin related transmembrane protein 1.
   
  
 0.513
RAB30
Uncharacterized protein.
   
  
 0.510
SGCB
Leucine rich repeat containing 66.
      
 0.504
NIPAL2
NIPA like domain containing 2.
      
 0.474
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.