STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SF1Splicing factor 1 isoform 1. (639 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.990
SF3A2
Splicing factor 3a subunit 2.
   
 0.978
SF3A1
Splicing factor 3A subunit 1 isoform 1.
   
 0.973
SF3A3
Splicing factor 3a subunit 3.
   
 0.963
CDC5L
Cell division cycle 5-like protein.
   
 
 0.952
DDX46
Putative ATP-dependent RNA helicase DDX46.
   
 0.899
ENSMMUP00000067050
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.899
PRPF40B
Pre-mRNA processing factor 40 homolog B.
    
 
 0.897
SF3B1
SF3b1 domain-containing protein.
   
 0.868
RBM25
RNA binding motif protein 25.
   
 0.849
Your Current Organism:
Macaca mulatta
NCBI taxonomy Id: 9544
Other names: M. mulatta, Rhesus monkey, rhesus macaque, rhesus macaques, rhesus monkeys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.