STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM40_2791Putative molybdopterin binding domain protein. (271 aa)    
Predicted Functional Partners:
DM40_2792
Etoposide-induced 2.4 family protein.
 
     0.831
DM40_4847
Bifunctional NMN adenylyltransferase/Nudix hydrolase; Belongs to the Nudix hydrolase family.
    
 0.772
DM40_2794
Lactonase, 7-bladed beta-propeller family protein.
    
  0.736
nadD
Cytidylyltransferase family protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
    
 0.709
nadC
nadC: nicotinate-nucleotide diphosphorylase; Belongs to the NadC/ModD family.
    
 0.649
ygaD
Protein YgaD; Belongs to the CinA family.
    
 0.630
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
 
 0.630
DM40_352
Hypothetical protein; FAD linked oxidase, C-terminal domain protein.
 
     0.570
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.559
DM40_2793
Fatty acid hydroxylase superfamily protein.
       0.555
Your Current Organism:
Burkholderia cenocepacia
NCBI taxonomy Id: 95486
Other names: ATCC BAA-245, ATCC:BAA:245, B. cenocepacia, Burkholderia cenocepacia Vandamme et al. 2003, Burkholderia cepacia genomovar III, Burkholderia cepacia genomovar IIIb, CCM 4899, CCUG 48434, DSM 16553, LMG 16656, LMG:16656, NCTC 13227
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