Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | GSX1 | ENSGGOP00000005366 | ENSGGOP00000004904 | Achaete-scute family bHLH transcription factor 1. | GS homeobox 1. | 0.458 |
ASCL1 | TBR1 | ENSGGOP00000005366 | ENSGGOP00000018610 | Achaete-scute family bHLH transcription factor 1. | T-box brain transcription factor 1. | 0.423 |
DNM3 | GSX1 | ENSGGOP00000008501 | ENSGGOP00000004904 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | GS homeobox 1. | 0.661 |
DNM3 | L1CAM | ENSGGOP00000008501 | ENSGGOP00000034954 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | L1 cell adhesion molecule. | 0.757 |
DNM3 | OPCML | ENSGGOP00000008501 | ENSGGOP00000000426 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Opioid binding protein/cell adhesion molecule like. | 0.828 |
DNM3 | RNF38 | ENSGGOP00000008501 | ENSGGOP00000038129 | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Ring finger protein 38. | 0.855 |
GSX1 | ASCL1 | ENSGGOP00000004904 | ENSGGOP00000005366 | GS homeobox 1. | Achaete-scute family bHLH transcription factor 1. | 0.458 |
GSX1 | DNM3 | ENSGGOP00000004904 | ENSGGOP00000008501 | GS homeobox 1. | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.661 |
GSX1 | L1CAM | ENSGGOP00000004904 | ENSGGOP00000034954 | GS homeobox 1. | L1 cell adhesion molecule. | 0.468 |
GSX1 | OPCML | ENSGGOP00000004904 | ENSGGOP00000000426 | GS homeobox 1. | Opioid binding protein/cell adhesion molecule like. | 0.619 |
GSX1 | PBX1 | ENSGGOP00000004904 | ENSGGOP00000011021 | GS homeobox 1. | PBX homeobox 1. | 0.440 |
GSX1 | PBX2 | ENSGGOP00000004904 | ENSGGOP00000002289 | GS homeobox 1. | PBX homeobox 2. | 0.448 |
GSX1 | PBX3 | ENSGGOP00000004904 | ENSGGOP00000008823 | GS homeobox 1. | Homeobox domain-containing protein. | 0.440 |
GSX1 | PBX4 | ENSGGOP00000004904 | ENSGGOP00000005874 | GS homeobox 1. | PBX homeobox 4. | 0.440 |
GSX1 | RNF38 | ENSGGOP00000004904 | ENSGGOP00000038129 | GS homeobox 1. | Ring finger protein 38. | 0.711 |
GSX1 | TBR1 | ENSGGOP00000004904 | ENSGGOP00000018610 | GS homeobox 1. | T-box brain transcription factor 1. | 0.708 |
L1CAM | DNM3 | ENSGGOP00000034954 | ENSGGOP00000008501 | L1 cell adhesion molecule. | Dynamin 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.757 |
L1CAM | GSX1 | ENSGGOP00000034954 | ENSGGOP00000004904 | L1 cell adhesion molecule. | GS homeobox 1. | 0.468 |
L1CAM | OPCML | ENSGGOP00000034954 | ENSGGOP00000000426 | L1 cell adhesion molecule. | Opioid binding protein/cell adhesion molecule like. | 0.502 |
L1CAM | RNF38 | ENSGGOP00000034954 | ENSGGOP00000038129 | L1 cell adhesion molecule. | Ring finger protein 38. | 0.762 |
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