Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOSB | NR4A2 | ENSGGOP00000021346 | ENSGGOP00000010903 | FosB proto-oncogene, AP-1 transcription factor subunit. | Nuclear receptor subfamily 4 group A member 2. | 0.769 |
FOSB | NR4A3 | ENSGGOP00000021346 | ENSGGOP00000019326 | FosB proto-oncogene, AP-1 transcription factor subunit. | Nuclear receptor subfamily 4 group A member 3. | 0.515 |
G3QN04_GORGO | LMX1A | ENSGGOP00000003905 | ENSGGOP00000003228 | Tyrosine hydroxylase. | LIM homeobox transcription factor 1 alpha. | 0.582 |
G3QN04_GORGO | NR4A2 | ENSGGOP00000003905 | ENSGGOP00000010903 | Tyrosine hydroxylase. | Nuclear receptor subfamily 4 group A member 2. | 0.649 |
G3QN04_GORGO | PITX3 | ENSGGOP00000003905 | ENSGGOP00000018289 | Tyrosine hydroxylase. | Homeobox protein. | 0.671 |
LMX1A | G3QN04_GORGO | ENSGGOP00000003228 | ENSGGOP00000003905 | LIM homeobox transcription factor 1 alpha. | Tyrosine hydroxylase. | 0.582 |
LMX1A | NR4A2 | ENSGGOP00000003228 | ENSGGOP00000010903 | LIM homeobox transcription factor 1 alpha. | Nuclear receptor subfamily 4 group A member 2. | 0.670 |
LMX1A | PITX3 | ENSGGOP00000003228 | ENSGGOP00000018289 | LIM homeobox transcription factor 1 alpha. | Homeobox protein. | 0.447 |
MYT1 | NEUROG3 | ENSGGOP00000006203 | ENSGGOP00000045960 | Myelin transcription factor 1. | Neurogenin 3. | 0.845 |
MYT1 | NR4A2 | ENSGGOP00000006203 | ENSGGOP00000010903 | Myelin transcription factor 1. | Nuclear receptor subfamily 4 group A member 2. | 0.733 |
MYT1 | SIM1 | ENSGGOP00000006203 | ENSGGOP00000043460 | Myelin transcription factor 1. | SIM bHLH transcription factor 1. | 0.529 |
MYT1 | ZFHX4 | ENSGGOP00000006203 | ENSGGOP00000022938 | Myelin transcription factor 1. | Zinc finger homeobox 4. | 0.806 |
NEUROG3 | MYT1 | ENSGGOP00000045960 | ENSGGOP00000006203 | Neurogenin 3. | Myelin transcription factor 1. | 0.845 |
NEUROG3 | NR4A2 | ENSGGOP00000045960 | ENSGGOP00000010903 | Neurogenin 3. | Nuclear receptor subfamily 4 group A member 2. | 0.687 |
NEUROG3 | ZFHX4 | ENSGGOP00000045960 | ENSGGOP00000022938 | Neurogenin 3. | Zinc finger homeobox 4. | 0.798 |
NR4A2 | FOSB | ENSGGOP00000010903 | ENSGGOP00000021346 | Nuclear receptor subfamily 4 group A member 2. | FosB proto-oncogene, AP-1 transcription factor subunit. | 0.769 |
NR4A2 | G3QN04_GORGO | ENSGGOP00000010903 | ENSGGOP00000003905 | Nuclear receptor subfamily 4 group A member 2. | Tyrosine hydroxylase. | 0.649 |
NR4A2 | LMX1A | ENSGGOP00000010903 | ENSGGOP00000003228 | Nuclear receptor subfamily 4 group A member 2. | LIM homeobox transcription factor 1 alpha. | 0.670 |
NR4A2 | MYT1 | ENSGGOP00000010903 | ENSGGOP00000006203 | Nuclear receptor subfamily 4 group A member 2. | Myelin transcription factor 1. | 0.733 |
NR4A2 | NEUROG3 | ENSGGOP00000010903 | ENSGGOP00000045960 | Nuclear receptor subfamily 4 group A member 2. | Neurogenin 3. | 0.687 |
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