Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COL11A1 | COL16A1 | ENSGGOP00000043344 | ENSGGOP00000015384 | Collagen type XI alpha 1 chain. | Collagen type XVI alpha 1 chain. | 0.805 |
COL11A1 | COL1A1 | ENSGGOP00000043344 | ENSGGOP00000012899 | Collagen type XI alpha 1 chain. | Collagen type I alpha 1 chain. | 0.901 |
COL11A1 | COL1A2 | ENSGGOP00000043344 | ENSGGOP00000005910 | Collagen type XI alpha 1 chain. | Collagen type I alpha 2 chain. | 0.903 |
COL11A1 | COL3A1 | ENSGGOP00000043344 | ENSGGOP00000016147 | Collagen type XI alpha 1 chain. | Collagen type III alpha 1 chain. | 0.828 |
COL11A1 | COL5A1 | ENSGGOP00000043344 | ENSGGOP00000011189 | Collagen type XI alpha 1 chain. | Collagen type V alpha 1 chain. | 0.778 |
COL11A1 | COL5A2 | ENSGGOP00000043344 | ENSGGOP00000013692 | Collagen type XI alpha 1 chain. | Collagen type V alpha 2 chain. | 0.948 |
COL11A1 | FBN1 | ENSGGOP00000043344 | ENSGGOP00000003257 | Collagen type XI alpha 1 chain. | Fibrillin 1. | 0.461 |
COL11A1 | LUM | ENSGGOP00000043344 | ENSGGOP00000022526 | Collagen type XI alpha 1 chain. | Lumican. | 0.571 |
COL11A1 | PLOD1 | ENSGGOP00000043344 | ENSGGOP00000043333 | Collagen type XI alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. | 0.454 |
COL16A1 | COL11A1 | ENSGGOP00000015384 | ENSGGOP00000043344 | Collagen type XVI alpha 1 chain. | Collagen type XI alpha 1 chain. | 0.805 |
COL16A1 | COL1A1 | ENSGGOP00000015384 | ENSGGOP00000012899 | Collagen type XVI alpha 1 chain. | Collagen type I alpha 1 chain. | 0.757 |
COL16A1 | COL1A2 | ENSGGOP00000015384 | ENSGGOP00000005910 | Collagen type XVI alpha 1 chain. | Collagen type I alpha 2 chain. | 0.811 |
COL16A1 | COL3A1 | ENSGGOP00000015384 | ENSGGOP00000016147 | Collagen type XVI alpha 1 chain. | Collagen type III alpha 1 chain. | 0.742 |
COL16A1 | COL5A1 | ENSGGOP00000015384 | ENSGGOP00000011189 | Collagen type XVI alpha 1 chain. | Collagen type V alpha 1 chain. | 0.758 |
COL16A1 | COL5A2 | ENSGGOP00000015384 | ENSGGOP00000013692 | Collagen type XVI alpha 1 chain. | Collagen type V alpha 2 chain. | 0.826 |
COL16A1 | FBN1 | ENSGGOP00000015384 | ENSGGOP00000003257 | Collagen type XVI alpha 1 chain. | Fibrillin 1. | 0.458 |
COL16A1 | LUM | ENSGGOP00000015384 | ENSGGOP00000022526 | Collagen type XVI alpha 1 chain. | Lumican. | 0.511 |
COL16A1 | PLOD1 | ENSGGOP00000015384 | ENSGGOP00000043333 | Collagen type XVI alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. | 0.484 |
COL1A1 | COL11A1 | ENSGGOP00000012899 | ENSGGOP00000043344 | Collagen type I alpha 1 chain. | Collagen type XI alpha 1 chain. | 0.901 |
COL1A1 | COL16A1 | ENSGGOP00000012899 | ENSGGOP00000015384 | Collagen type I alpha 1 chain. | Collagen type XVI alpha 1 chain. | 0.757 |
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