STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A2Collagen type V alpha 2 chain. (1499 aa)    
Predicted Functional Partners:
COL5A1
Collagen type V alpha 1 chain.
  
0.996
COL1A2
Collagen type I alpha 2 chain.
  
0.985
COL3A1
Collagen type III alpha 1 chain.
  
 
0.985
COL1A1
Collagen type I alpha 1 chain.
  
 
0.979
COL11A1
Collagen type XI alpha 1 chain.
  
0.948
FBN1
Fibrillin 1.
   
 0.902
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.882
LUM
Lumican.
   
 0.841
CRTAP
Cartilage associated protein.
    
 0.835
COL16A1
Collagen type XVI alpha 1 chain.
  
0.826
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
Server load: low (22%) [HD]