STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXF1Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
     
 0.814
G3R5D7_GORGO
Uncharacterized protein.
   
 0.708
BMP4
Bone morphogenetic protein 4.
     
 0.674
ENSGGOP00000024523
annotation not available
     
 0.674
GLI3
GLI family zinc finger 3.
    
 0.658
IHH
HH_signal domain-containing protein.
     
 0.652
G3RF44_GORGO
Forkhead box C2.
 
    
 0.570
SFTPB
Surfactant protein B.
      
 0.568
GLI2
GLI family zinc finger 2.
    
 0.564
CPS1
Carbamoyl-phosphate synthase 1.
    
 
 0.543
Your Current Organism:
Gorilla gorilla
NCBI taxonomy Id: 9593
Other names: G. gorilla, Troglodytes gorilla, gorilla, western gorilla
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.