STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPPAP00000001113Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.976
LMNA
Lamin A/C; Belongs to the intermediate filament family.
   
 0.949
LEMD3
LEM domain containing 3.
   
 0.825
LMNB1
Lamin B1; Belongs to the intermediate filament family.
   
 0.782
LMNB2
Lamin B2; Belongs to the intermediate filament family.
   
 0.774
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 
 0.697
H3-4
Histone cluster 3 H3.
   
 
 0.676
ACTL6A
Actin like 6A; Belongs to the actin family.
   
 
 0.669
ACTL6B
Actin like 6B; Belongs to the actin family.
   
 
 0.666
TMPO
Thymopoietin.
    
 0.665
Your Current Organism:
Pan paniscus
NCBI taxonomy Id: 9597
Other names: P. paniscus, bonobo, pygmy chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.