Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASH2L | MYOD1 | ENSPTRP00000068732 | ENSPTRP00000005943 | ASH2 like, histone lysine methyltransferase complex subunit. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.461 |
ASH2L | PAX7 | ENSPTRP00000068732 | ENSPTRP00000000452 | ASH2 like, histone lysine methyltransferase complex subunit. | PAX7 isoform 2. | 0.675 |
ENSPTRP00000089297 | PAX3 | ENSPTRP00000089297 | ENSPTRP00000090733 | annotation not available | PAX3 isoform 4. | 0.613 |
ENSPTRP00000089297 | PAX7 | ENSPTRP00000089297 | ENSPTRP00000000452 | annotation not available | PAX7 isoform 2. | 0.646 |
FOXO1 | MYOD1 | ENSPTRP00000009886 | ENSPTRP00000005943 | FOXO1 isoform 1. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.461 |
FOXO1 | PAX3 | ENSPTRP00000009886 | ENSPTRP00000090733 | FOXO1 isoform 1. | PAX3 isoform 4. | 0.674 |
FOXO1 | PAX7 | ENSPTRP00000009886 | ENSPTRP00000000452 | FOXO1 isoform 1. | PAX7 isoform 2. | 0.646 |
MYF5 | MYF6 | ENSPTRP00000008937 | ENSPTRP00000008936 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | Myogenic factor 6. | 0.803 |
MYF5 | MYOD1 | ENSPTRP00000008937 | ENSPTRP00000005943 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.400 |
MYF5 | MYOG | ENSPTRP00000008937 | ENSPTRP00000044084 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | MYOG isoform 1. | 0.663 |
MYF5 | PAX3 | ENSPTRP00000008937 | ENSPTRP00000090733 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | PAX3 isoform 4. | 0.796 |
MYF5 | PAX7 | ENSPTRP00000008937 | ENSPTRP00000000452 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | PAX7 isoform 2. | 0.754 |
MYF6 | MYF5 | ENSPTRP00000008936 | ENSPTRP00000008937 | Myogenic factor 6. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.803 |
MYF6 | MYOD1 | ENSPTRP00000008936 | ENSPTRP00000005943 | Myogenic factor 6. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.768 |
MYF6 | MYOG | ENSPTRP00000008936 | ENSPTRP00000044084 | Myogenic factor 6. | MYOG isoform 1. | 0.743 |
MYF6 | PAX3 | ENSPTRP00000008936 | ENSPTRP00000090733 | Myogenic factor 6. | PAX3 isoform 4. | 0.762 |
MYF6 | PAX7 | ENSPTRP00000008936 | ENSPTRP00000000452 | Myogenic factor 6. | PAX7 isoform 2. | 0.676 |
MYOD1 | ASH2L | ENSPTRP00000005943 | ENSPTRP00000068732 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | ASH2 like, histone lysine methyltransferase complex subunit. | 0.461 |
MYOD1 | FOXO1 | ENSPTRP00000005943 | ENSPTRP00000009886 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | FOXO1 isoform 1. | 0.461 |
MYOD1 | MYF5 | ENSPTRP00000005943 | ENSPTRP00000008937 | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. | 0.400 |
page 1 of 3