Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF1 | CPSF2 | ENSPTRP00000063855 | ENSPTRP00000011335 | CPSF1 isoform 10. | Cleavage and polyadenylation specificity factor subunit 2. | 0.996 |
CPSF1 | CPSF3 | ENSPTRP00000063855 | ENSPTRP00000020015 | CPSF1 isoform 10. | Cleavage and polyadenylation specificity factor 73 kDa subunit. | 0.994 |
CPSF1 | CPSF4 | ENSPTRP00000063855 | ENSPTRP00000033281 | CPSF1 isoform 10. | Cleavage and polyadenylation specific factor 4, 30kDa. | 0.996 |
CPSF1 | CPSF6 | ENSPTRP00000063855 | ENSPTRP00000008836 | CPSF1 isoform 10. | CPSF6 isoform 3. | 0.922 |
CPSF1 | CPSF7 | ENSPTRP00000063855 | ENSPTRP00000006436 | CPSF1 isoform 10. | CPSF7 isoform 1. | 0.956 |
CPSF1 | CSTF1 | ENSPTRP00000063855 | ENSPTRP00000023478 | CPSF1 isoform 10. | Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa. | 0.888 |
CPSF1 | CSTF2 | ENSPTRP00000063855 | ENSPTRP00000067955 | CPSF1 isoform 10. | Cleavage stimulation factor subunit 2. | 0.951 |
CPSF1 | NUDT21 | ENSPTRP00000063855 | ENSPTRP00000013877 | CPSF1 isoform 10. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.904 |
CPSF1 | SYMPK | ENSPTRP00000063855 | ENSPTRP00000064431 | CPSF1 isoform 10. | SYMPK isoform 3. | 0.972 |
CPSF1-2 | CPSF2 | ENSPTRP00000075129 | ENSPTRP00000011335 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage and polyadenylation specificity factor subunit 2. | 0.993 |
CPSF1-2 | CPSF3 | ENSPTRP00000075129 | ENSPTRP00000020015 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage and polyadenylation specificity factor 73 kDa subunit. | 0.988 |
CPSF1-2 | CPSF4 | ENSPTRP00000075129 | ENSPTRP00000033281 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage and polyadenylation specific factor 4, 30kDa. | 0.992 |
CPSF1-2 | CPSF6 | ENSPTRP00000075129 | ENSPTRP00000008836 | Cleavage and polyadenylation specific factor 1, 160kDa. | CPSF6 isoform 3. | 0.838 |
CPSF1-2 | CPSF7 | ENSPTRP00000075129 | ENSPTRP00000006436 | Cleavage and polyadenylation specific factor 1, 160kDa. | CPSF7 isoform 1. | 0.910 |
CPSF1-2 | CSTF1 | ENSPTRP00000075129 | ENSPTRP00000023478 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa. | 0.768 |
CPSF1-2 | CSTF2 | ENSPTRP00000075129 | ENSPTRP00000067955 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage stimulation factor subunit 2. | 0.898 |
CPSF1-2 | NUDT21 | ENSPTRP00000075129 | ENSPTRP00000013877 | Cleavage and polyadenylation specific factor 1, 160kDa. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.800 |
CPSF1-2 | SYMPK | ENSPTRP00000075129 | ENSPTRP00000064431 | Cleavage and polyadenylation specific factor 1, 160kDa. | SYMPK isoform 3. | 0.942 |
CPSF2 | CPSF1 | ENSPTRP00000011335 | ENSPTRP00000063855 | Cleavage and polyadenylation specificity factor subunit 2. | CPSF1 isoform 10. | 0.996 |
CPSF2 | CPSF1-2 | ENSPTRP00000011335 | ENSPTRP00000075129 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage and polyadenylation specific factor 1, 160kDa. | 0.993 |
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