STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINH1Serpin peptidase inhibitor, clade H (Heat shock protein 47), member 1, (Collagen binding protein 1); Belongs to the serpin family. (418 aa)    
Predicted Functional Partners:
FKBP10
Peptidylprolyl isomerase.
   
 
 0.856
COL1A1
Collagen type I alpha 1 chain.
   
 0.841
COL1A2
Collagen type I alpha 2 chain.
   
 0.804
CRTAP
Cartilage associated protein.
   
 
 0.803
COL5A2
Collagen type V alpha 2 chain.
   
 0.795
P3H1
P3H1 isoform 6.
   
 
 0.787
COL3A1
Collagen type III alpha 1 chain.
   
 0.768
OS9
Osteosarcoma amplified 9, endoplasmic reticulum lectin.
    
 
 0.748
COL4A2
Collagen type IV alpha 2 chain.
   
 0.736
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.723
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.