STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPDC3Popeye domain containing 3. (291 aa)    
Predicted Functional Partners:
CPNE8
CPNE8 isoform 2.
      
 0.704
ROBO1
Roundabout guidance receptor 1.
      
 0.493
CPVL
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.470
SKAP2
Src kinase associated phosphoprotein 2.
      
 0.470
LRRC7
LRRC7 isoform 11.
    
 
 0.469
ROBO3
ROBO3 isoform 3.
      
 0.439
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.439
CNTNAP5
CNTNAP5 isoform 2.
      
 0.418
SEMA3C
SEMA3C isoform 1; Belongs to the semaphorin family.
      
 0.403
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.