STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13BVacuolar protein sorting 13 homolog B. (863 aa)    
Predicted Functional Partners:
ENSPTRP00000090255
annotation not available
 
     0.942
PGAP2
Post-GPI attachment to proteins 2.
   
  
 0.863
H2AJ
H2AFJ isoform 2.
      
 0.809
SENP1
SUMO1/sentrin specific peptidase 1.
      
 0.698
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.668
ZNF782
Zinc finger protein 782.
      
 0.667
GXYLT1
Glucoside xylosyltransferase 1.
      
 0.665
STON2
STON2 isoform 1; Belongs to the Stoned B family.
      
 0.630
ZDHHC24
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.614
CATSPERB
CATSPERB isoform 2.
      
 0.613
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.