Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACSS3 | ASIC2 | ENSPTRP00000008942 | ENSPTRP00000015351 | Acyl-CoA synthetase short-chain family member 3. | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.729 |
ACSS3 | LLPH | ENSPTRP00000008942 | ENSPTRP00000008810 | Acyl-CoA synthetase short-chain family member 3. | LLP homolog, long-term synaptic facilitation (Aplysia). | 0.789 |
ACSS3 | LRRTM4 | ENSPTRP00000008942 | ENSPTRP00000020782 | Acyl-CoA synthetase short-chain family member 3. | LRRTM4 isoform 3. | 0.812 |
ACSS3 | MSRB3 | ENSPTRP00000008942 | ENSPTRP00000039163 | Acyl-CoA synthetase short-chain family member 3. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.698 |
ACSS3 | PIGQ | ENSPTRP00000008942 | ENSPTRP00000084994 | Acyl-CoA synthetase short-chain family member 3. | Phosphatidylinositol glycan anchor biosynthesis class Q. | 0.510 |
ACSS3 | RFX8 | ENSPTRP00000008942 | ENSPTRP00000021057 | Acyl-CoA synthetase short-chain family member 3. | RFX8 isoform 3. | 0.728 |
ACSS3 | THOC1 | ENSPTRP00000008942 | ENSPTRP00000016706 | Acyl-CoA synthetase short-chain family member 3. | THOC1 isoform 2. | 0.763 |
ASIC2 | ACSS3 | ENSPTRP00000015351 | ENSPTRP00000008942 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Acyl-CoA synthetase short-chain family member 3. | 0.729 |
ASIC2 | LLPH | ENSPTRP00000015351 | ENSPTRP00000008810 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | LLP homolog, long-term synaptic facilitation (Aplysia). | 0.735 |
ASIC2 | LRRTM4 | ENSPTRP00000015351 | ENSPTRP00000020782 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | LRRTM4 isoform 3. | 0.765 |
ASIC2 | MSRB3 | ENSPTRP00000015351 | ENSPTRP00000039163 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.654 |
ASIC2 | PIGQ | ENSPTRP00000015351 | ENSPTRP00000084994 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Phosphatidylinositol glycan anchor biosynthesis class Q. | 0.772 |
ASIC2 | RFX8 | ENSPTRP00000015351 | ENSPTRP00000021057 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | RFX8 isoform 3. | 0.692 |
ASIC2 | THOC1 | ENSPTRP00000015351 | ENSPTRP00000016706 | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | THOC1 isoform 2. | 0.728 |
CAT | MSRA | ENSPTRP00000006074 | ENSPTRP00000079034 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Methionine sulfoxide reductase A. | 0.565 |
CAT | MSRB3 | ENSPTRP00000006074 | ENSPTRP00000039163 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.530 |
LLPH | ACSS3 | ENSPTRP00000008810 | ENSPTRP00000008942 | LLP homolog, long-term synaptic facilitation (Aplysia). | Acyl-CoA synthetase short-chain family member 3. | 0.789 |
LLPH | ASIC2 | ENSPTRP00000008810 | ENSPTRP00000015351 | LLP homolog, long-term synaptic facilitation (Aplysia). | Acid sensing ion channel subunit 2; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.735 |
LLPH | LRRTM4 | ENSPTRP00000008810 | ENSPTRP00000020782 | LLP homolog, long-term synaptic facilitation (Aplysia). | LRRTM4 isoform 3. | 0.793 |
LLPH | MSRB3 | ENSPTRP00000008810 | ENSPTRP00000039163 | LLP homolog, long-term synaptic facilitation (Aplysia). | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.715 |
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