STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCBP2Poly(rC) binding protein 2. (366 aa)    
Predicted Functional Partners:
PCBP1
Poly(rC) binding protein 1.
  
0.994
ITCH
E3 ubiquitin-protein ligase.
    
 0.955
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.821
ENSPTRP00000084315
annotation not available
   
 0.821
HNRNPD
HNRNPD isoform 1.
   
 0.799
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
   
  
 0.795
PTBP1
PTBP1 isoform 2.
   
 0.794
ENSPTRP00000062255
annotation not available
   
 0.782
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
  
 0.781
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
0.780
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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