STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHB17Protocadherin beta-17. (571 aa)    
Predicted Functional Partners:
AMY1C
Alpha-amylase.
   
 
 0.596
ZNF131
Zinc finger protein 131.
     
 0.592
UGT2B10
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.582
MYT1
Myelin transcription factor 1.
   
  
 0.557
H2AW
Histone H2A; Belongs to the histone H2A family.
    
 
 0.553
UGT1A3
UDP-glucuronosyltransferase 1-3 isoform X2.
      
 0.547
CDK5R2
Cyclin-dependent kinase 5 activator.
    
 
 0.539
BHLHE23
Basic helix-loop-helix family member e23.
   
  
 0.532
AMY2A
Alpha-amylase.
   
 
 0.520
NEUROG3
NEUROG3 isoform 1.
   
  
 0.520
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.