Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALYREF | HNRNPH1 | ENSPPYP00000009820 | ENSPPYP00000018037 | Aly/REF export factor. | HNRNPH1 isoform 9. | 0.831 |
ALYREF | NONO | ENSPPYP00000009820 | ENSPPYP00000022896 | Aly/REF export factor. | Non-POU domain-containing octamer-binding protein; DNA- and RNA binding protein, involved in several nuclear processes. Binds the conventional octamer sequence in double-stranded DNA. Also binds single-stranded DNA and RNA at a site independent of the duplex site. Involved in pre-mRNA splicing, probably as a heterodimer with SFPQ. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. Together with PSPC1, required for the formation of nuclear paraspeckles. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclea [...] | 0.408 |
ALYREF | PTBP1 | ENSPPYP00000009820 | ENSPPYP00000010426 | Aly/REF export factor. | PTBP1 isoform 4. | 0.588 |
ALYREF | RBM14 | ENSPPYP00000009820 | ENSPPYP00000003492 | Aly/REF export factor. | RNA-binding protein 14; May function as a nuclear receptor coactivator, enhancing transcription through other coactivators such as NCOA6 and CITED1. Regulates centriole biogenesis by suppressing the formation of aberrant centriolar protein complexes in the cytoplasm and thus preserving mitotic spindle integrity. Prevents the formation of the STIL-CENPJ complex (which can induce the formation of aberrant centriolar protein complexes) by interfering with the interaction of STIL with CENPJ. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the [...] | 0.688 |
ALYREF | SFPQ | ENSPPYP00000009820 | ENSPPYP00000001801 | Aly/REF export factor. | Splicing factor proline and glutamine rich. | 0.573 |
ALYREF | SNRNP70 | ENSPPYP00000009820 | ENSPPYP00000011458 | Aly/REF export factor. | SNRNP70 isoform 3. | 0.718 |
ALYREF | SRSF1 | ENSPPYP00000009820 | ENSPPYP00000024624 | Aly/REF export factor. | Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...] | 0.913 |
FUS | HNRNPH1 | ENSPPYP00000008259 | ENSPPYP00000018037 | FUS isoform 1. | HNRNPH1 isoform 9. | 0.798 |
FUS | NONO | ENSPPYP00000008259 | ENSPPYP00000022896 | FUS isoform 1. | Non-POU domain-containing octamer-binding protein; DNA- and RNA binding protein, involved in several nuclear processes. Binds the conventional octamer sequence in double-stranded DNA. Also binds single-stranded DNA and RNA at a site independent of the duplex site. Involved in pre-mRNA splicing, probably as a heterodimer with SFPQ. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. Together with PSPC1, required for the formation of nuclear paraspeckles. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclea [...] | 0.768 |
FUS | PSPC1 | ENSPPYP00000008259 | ENSPPYP00000005907 | FUS isoform 1. | PSPC1 isoform 6. | 0.727 |
FUS | PTBP1 | ENSPPYP00000008259 | ENSPPYP00000010426 | FUS isoform 1. | PTBP1 isoform 4. | 0.681 |
FUS | RBM14 | ENSPPYP00000008259 | ENSPPYP00000003492 | FUS isoform 1. | RNA-binding protein 14; May function as a nuclear receptor coactivator, enhancing transcription through other coactivators such as NCOA6 and CITED1. Regulates centriole biogenesis by suppressing the formation of aberrant centriolar protein complexes in the cytoplasm and thus preserving mitotic spindle integrity. Prevents the formation of the STIL-CENPJ complex (which can induce the formation of aberrant centriolar protein complexes) by interfering with the interaction of STIL with CENPJ. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the [...] | 0.651 |
FUS | SFPQ | ENSPPYP00000008259 | ENSPPYP00000001801 | FUS isoform 1. | Splicing factor proline and glutamine rich. | 0.850 |
FUS | SNRNP70 | ENSPPYP00000008259 | ENSPPYP00000011458 | FUS isoform 1. | SNRNP70 isoform 3. | 0.806 |
FUS | SRSF1 | ENSPPYP00000008259 | ENSPPYP00000024624 | FUS isoform 1. | Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...] | 0.758 |
HNRNPH1 | ALYREF | ENSPPYP00000018037 | ENSPPYP00000009820 | HNRNPH1 isoform 9. | Aly/REF export factor. | 0.831 |
HNRNPH1 | FUS | ENSPPYP00000018037 | ENSPPYP00000008259 | HNRNPH1 isoform 9. | FUS isoform 1. | 0.798 |
HNRNPH1 | NONO | ENSPPYP00000018037 | ENSPPYP00000022896 | HNRNPH1 isoform 9. | Non-POU domain-containing octamer-binding protein; DNA- and RNA binding protein, involved in several nuclear processes. Binds the conventional octamer sequence in double-stranded DNA. Also binds single-stranded DNA and RNA at a site independent of the duplex site. Involved in pre-mRNA splicing, probably as a heterodimer with SFPQ. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. Together with PSPC1, required for the formation of nuclear paraspeckles. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclea [...] | 0.433 |
HNRNPH1 | PTBP1 | ENSPPYP00000018037 | ENSPPYP00000010426 | HNRNPH1 isoform 9. | PTBP1 isoform 4. | 0.885 |
HNRNPH1 | RBM14 | ENSPPYP00000018037 | ENSPPYP00000003492 | HNRNPH1 isoform 9. | RNA-binding protein 14; May function as a nuclear receptor coactivator, enhancing transcription through other coactivators such as NCOA6 and CITED1. Regulates centriole biogenesis by suppressing the formation of aberrant centriolar protein complexes in the cytoplasm and thus preserving mitotic spindle integrity. Prevents the formation of the STIL-CENPJ complex (which can induce the formation of aberrant centriolar protein complexes) by interfering with the interaction of STIL with CENPJ. Plays a role in the regulation of DNA virus-mediated innate immune response by assembling into the [...] | 0.750 |
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