Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABCD1 | ABCD2 | ENSPPYP00000023337 | ENSPPYP00000005037 | ABCD1 isoform 1. | ATP binding cassette subfamily D member 2. | 0.992 |
ABCD1 | ABCD4 | ENSPPYP00000023337 | ENSPPYP00000006803 | ABCD1 isoform 1. | ATP binding cassette subfamily D member 4. | 0.960 |
ABCD1 | LMBRD1 | ENSPPYP00000023337 | ENSPPYP00000018748 | ABCD1 isoform 1. | LMBRD1 isoform 1. | 0.581 |
ABCD1 | PEX19 | ENSPPYP00000023337 | ENSPPYP00000000743 | ABCD1 isoform 1. | Peroxisomal biogenesis factor 19; Necessary for early peroxisomal biogenesis. Acts both as a cytosolic chaperone and as an import receptor for peroxisomal membrane proteins (PMPs). Binds and stabilizes newly synthesized PMPs in the cytoplasm by interacting with their hydrophobic membrane-spanning domains, and targets them to the peroxisome membrane by binding to the integral membrane protein PEX3. Excludes CDKN2A from the nucleus and prevents its interaction with MDM2, which results in active degradation of TP53. | 0.879 |
ABCD1 | PEX3 | ENSPPYP00000023337 | ENSPPYP00000019104 | ABCD1 isoform 1. | Peroxisomal biogenesis factor 3. | 0.817 |
ABCD2 | ABCD1 | ENSPPYP00000005037 | ENSPPYP00000023337 | ATP binding cassette subfamily D member 2. | ABCD1 isoform 1. | 0.992 |
ABCD2 | ABCD4 | ENSPPYP00000005037 | ENSPPYP00000006803 | ATP binding cassette subfamily D member 2. | ATP binding cassette subfamily D member 4. | 0.960 |
ABCD2 | LMBRD1 | ENSPPYP00000005037 | ENSPPYP00000018748 | ATP binding cassette subfamily D member 2. | LMBRD1 isoform 1. | 0.581 |
ABCD2 | PEX19 | ENSPPYP00000005037 | ENSPPYP00000000743 | ATP binding cassette subfamily D member 2. | Peroxisomal biogenesis factor 19; Necessary for early peroxisomal biogenesis. Acts both as a cytosolic chaperone and as an import receptor for peroxisomal membrane proteins (PMPs). Binds and stabilizes newly synthesized PMPs in the cytoplasm by interacting with their hydrophobic membrane-spanning domains, and targets them to the peroxisome membrane by binding to the integral membrane protein PEX3. Excludes CDKN2A from the nucleus and prevents its interaction with MDM2, which results in active degradation of TP53. | 0.807 |
ABCD2 | PEX3 | ENSPPYP00000005037 | ENSPPYP00000019104 | ATP binding cassette subfamily D member 2. | Peroxisomal biogenesis factor 3. | 0.710 |
ABCD4 | ABCD1 | ENSPPYP00000006803 | ENSPPYP00000023337 | ATP binding cassette subfamily D member 4. | ABCD1 isoform 1. | 0.960 |
ABCD4 | ABCD2 | ENSPPYP00000006803 | ENSPPYP00000005037 | ATP binding cassette subfamily D member 4. | ATP binding cassette subfamily D member 2. | 0.960 |
ABCD4 | CDH19 | ENSPPYP00000006803 | ENSPPYP00000010354 | ATP binding cassette subfamily D member 4. | CDH19 isoform 1; Cadherins are calcium-dependent cell adhesion proteins. | 0.710 |
ABCD4 | LMBRD1 | ENSPPYP00000006803 | ENSPPYP00000018748 | ATP binding cassette subfamily D member 4. | LMBRD1 isoform 1. | 0.969 |
ABCD4 | MAGEA1 | ENSPPYP00000006803 | ENSPPYP00000023321 | ATP binding cassette subfamily D member 4. | MAGEA1 isoform 1. | 0.712 |
ABCD4 | NOX3 | ENSPPYP00000006803 | ENSPPYP00000019175 | ATP binding cassette subfamily D member 4. | NOX3 isoform 1. | 0.827 |
ABCD4 | PEX19 | ENSPPYP00000006803 | ENSPPYP00000000743 | ATP binding cassette subfamily D member 4. | Peroxisomal biogenesis factor 19; Necessary for early peroxisomal biogenesis. Acts both as a cytosolic chaperone and as an import receptor for peroxisomal membrane proteins (PMPs). Binds and stabilizes newly synthesized PMPs in the cytoplasm by interacting with their hydrophobic membrane-spanning domains, and targets them to the peroxisome membrane by binding to the integral membrane protein PEX3. Excludes CDKN2A from the nucleus and prevents its interaction with MDM2, which results in active degradation of TP53. | 0.812 |
ABCD4 | PEX3 | ENSPPYP00000006803 | ENSPPYP00000019104 | ATP binding cassette subfamily D member 4. | Peroxisomal biogenesis factor 3. | 0.711 |
ABCD4 | RAD51 | ENSPPYP00000006803 | ENSPPYP00000007198 | ATP binding cassette subfamily D member 4. | DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] | 0.755 |
ABCD4 | SALL3 | ENSPPYP00000006803 | ENSPPYP00000010388 | ATP binding cassette subfamily D member 4. | SALL3 isoform 3. | 0.916 |
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