Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGO1 | AGO2 | ENSPPYP00000001789 | ENSPPYP00000021212 | Argonaute RISC component 1; Belongs to the argonaute family. | Eukaryotic translation initiation factor 2C. | 0.987 |
AGO1 | AGO3 | ENSPPYP00000001789 | ENSPPYP00000001788 | Argonaute RISC component 1; Belongs to the argonaute family. | Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. | 0.927 |
AGO1 | AGO4 | ENSPPYP00000001789 | ENSPPYP00000001790 | Argonaute RISC component 1; Belongs to the argonaute family. | Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. | 0.891 |
AGO1 | DGCR8 | ENSPPYP00000001789 | ENSPPYP00000012930 | Argonaute RISC component 1; Belongs to the argonaute family. | DGCR8 microprocessor complex subunit. | 0.804 |
AGO1 | DICER1 | ENSPPYP00000001789 | ENSPPYP00000006949 | Argonaute RISC component 1; Belongs to the argonaute family. | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.997 |
AGO1 | DROSHA | ENSPPYP00000001789 | ENSPPYP00000017166 | Argonaute RISC component 1; Belongs to the argonaute family. | DROSHA isoform 1. | 0.909 |
AGO1 | ENSPPYP00000023629 | ENSPPYP00000001789 | ENSPPYP00000023629 | Argonaute RISC component 1; Belongs to the argonaute family. | annotation not available | 0.981 |
AGO1 | PRKRA | ENSPPYP00000001789 | ENSPPYP00000014497 | Argonaute RISC component 1; Belongs to the argonaute family. | PRKRA isoform 1. | 0.776 |
AGO1 | TARBP2 | ENSPPYP00000001789 | ENSPPYP00000005227 | Argonaute RISC component 1; Belongs to the argonaute family. | RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] | 0.927 |
AGO1 | TNRC6A | ENSPPYP00000001789 | ENSPPYP00000008143 | Argonaute RISC component 1; Belongs to the argonaute family. | TNRC6A isoform 4. | 0.995 |
AGO2 | AGO1 | ENSPPYP00000021212 | ENSPPYP00000001789 | Eukaryotic translation initiation factor 2C. | Argonaute RISC component 1; Belongs to the argonaute family. | 0.987 |
AGO2 | AGO3 | ENSPPYP00000021212 | ENSPPYP00000001788 | Eukaryotic translation initiation factor 2C. | Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. | 0.961 |
AGO2 | AGO4 | ENSPPYP00000021212 | ENSPPYP00000001790 | Eukaryotic translation initiation factor 2C. | Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. | 0.891 |
AGO2 | DGCR8 | ENSPPYP00000021212 | ENSPPYP00000012930 | Eukaryotic translation initiation factor 2C. | DGCR8 microprocessor complex subunit. | 0.748 |
AGO2 | DICER1 | ENSPPYP00000021212 | ENSPPYP00000006949 | Eukaryotic translation initiation factor 2C. | Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily. | 0.988 |
AGO2 | DROSHA | ENSPPYP00000021212 | ENSPPYP00000017166 | Eukaryotic translation initiation factor 2C. | DROSHA isoform 1. | 0.904 |
AGO2 | ENSPPYP00000023629 | ENSPPYP00000021212 | ENSPPYP00000023629 | Eukaryotic translation initiation factor 2C. | annotation not available | 0.949 |
AGO2 | PRKRA | ENSPPYP00000021212 | ENSPPYP00000014497 | Eukaryotic translation initiation factor 2C. | PRKRA isoform 1. | 0.736 |
AGO2 | TARBP2 | ENSPPYP00000021212 | ENSPPYP00000005227 | Eukaryotic translation initiation factor 2C. | RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] | 0.985 |
AGO2 | TNRC6A | ENSPPYP00000021212 | ENSPPYP00000008143 | Eukaryotic translation initiation factor 2C. | TNRC6A isoform 4. | 0.987 |
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