STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP36Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. (1124 aa)    
Predicted Functional Partners:
DHX33
DHX33 isoform 1.
    
 
 0.774
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3; Regulatory protein which represses transcription and augments histone deacetylase activity of HDAC1. May have a potential role in tumor suppressor pathways through regulation of apoptosis. May function in the assembly and/or enzymatic activity of the mSin3A corepressor complex or in mediating interactions between the complex and other regulatory complexes (By similarity).
    
 0.627
ZUP1
Zinc finger containing ubiquitin peptidase 1.
      
 0.588
UTP14A
UTP14A isoform 2.
   
 
 0.586
RCE1
Ras converting CAAX endopeptidase 1.
     
 0.543
HIST2H2BE
Histone H2B; Belongs to the histone H2B family.
   
 
 0.472
MYC
MYC isoform 1.
    
 
 0.465
DNMBP
DNMBP isoform 3.
      
 0.457
USP28
USP28 isoform 2; Belongs to the peptidase C19 family.
      
 0.457
RAPGEF1
RAPGEF1 isoform 1.
      
 0.457
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.