Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DKC1 | FBL | ENSPPYP00000023387 | ENSPPYP00000011171 | DKC1 isoform 2. | FBL isoform 1. | 0.995 |
DKC1 | NAT10 | ENSPPYP00000023387 | ENSPPYP00000003867 | DKC1 isoform 2. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.948 |
DKC1 | NOP56 | ENSPPYP00000023387 | ENSPPYP00000012104 | DKC1 isoform 2. | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | 0.994 |
DKC1 | NOP58 | ENSPPYP00000023387 | ENSPPYP00000014621 | DKC1 isoform 2. | NOP58 isoform 1. | 0.994 |
DKC1 | RPP38 | ENSPPYP00000023387 | ENSPPYP00000002450 | DKC1 isoform 2. | Ribonuclease P/MRP subunit p38. | 0.877 |
DKC1 | RRP9 | ENSPPYP00000023387 | ENSPPYP00000015471 | DKC1 isoform 2. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.681 |
DKC1 | SNU13 | ENSPPYP00000023387 | ENSPPYP00000013255 | DKC1 isoform 2. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.953 |
DKC1 | UTP15 | ENSPPYP00000023387 | ENSPPYP00000017381 | DKC1 isoform 2. | U3 small nucleolar RNA-associated protein 15 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.508 |
DKC1 | UTP4 | ENSPPYP00000023387 | ENSPPYP00000008466 | DKC1 isoform 2. | UTP4 small subunit processome component. | 0.581 |
DKC1 | WDR43 | ENSPPYP00000023387 | ENSPPYP00000013991 | DKC1 isoform 2. | WDR43 isoform 1. | 0.566 |
FBL | DKC1 | ENSPPYP00000011171 | ENSPPYP00000023387 | FBL isoform 1. | DKC1 isoform 2. | 0.995 |
FBL | NAT10 | ENSPPYP00000011171 | ENSPPYP00000003867 | FBL isoform 1. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.980 |
FBL | NOP56 | ENSPPYP00000011171 | ENSPPYP00000012104 | FBL isoform 1. | Nucleolar protein 56; Involved in the early to middle stages of 60S ribosomal subunit biogenesis. Core component of box C/D small nucleolar ribonucleoprotein (snoRNP) particles. Required for the biogenesis of box C/D snoRNAs such U3, U8 and U14 snoRNAs (By similarity). | 0.999 |
FBL | NOP58 | ENSPPYP00000011171 | ENSPPYP00000014621 | FBL isoform 1. | NOP58 isoform 1. | 0.999 |
FBL | RPP38 | ENSPPYP00000011171 | ENSPPYP00000002450 | FBL isoform 1. | Ribonuclease P/MRP subunit p38. | 0.960 |
FBL | RRP9 | ENSPPYP00000011171 | ENSPPYP00000015471 | FBL isoform 1. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.998 |
FBL | SNU13 | ENSPPYP00000011171 | ENSPPYP00000013255 | FBL isoform 1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
FBL | UTP15 | ENSPPYP00000011171 | ENSPPYP00000017381 | FBL isoform 1. | U3 small nucleolar RNA-associated protein 15 homolog; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.978 |
FBL | UTP4 | ENSPPYP00000011171 | ENSPPYP00000008466 | FBL isoform 1. | UTP4 small subunit processome component. | 0.982 |
FBL | WDR43 | ENSPPYP00000011171 | ENSPPYP00000013991 | FBL isoform 1. | WDR43 isoform 1. | 0.976 |
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