STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA5GATA binding protein 5. (397 aa)    
Predicted Functional Partners:
CR201_G0004819
NKX2-5 isoform 1.
   
 0.836
ZFPM2
ZFPM2 isoform 1.
    
 0.768
LMO2
LMO2 isoform 1.
    
 0.672
CR201_G0019832
T0068022 isoform 1.
   
 0.643
LCT
LCT isoform 1.
      
 0.630
POSTN
POSTN isoform 4.
      
 0.625
ZFPM1
ZFPM1 isoform 1.
   
 0.608
FOXA1
FOXA1 isoform 1.
   
 0.604
TBX20
TBX20 isoform 1.
   
 
 0.592
LMCD1
LIM and cysteine rich domains 1.
    
 0.559
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.