Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CR201_G0053891 | EXO1 | ENSPPYP00000019636 | ENSPPYP00000000064 | PMS2 isoform 6. | EXO1 isoform 1. | 0.877 |
CR201_G0053891 | FAN1 | ENSPPYP00000019636 | ENSPPYP00000007127 | PMS2 isoform 6. | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.716 |
CR201_G0053891 | MLH1 | ENSPPYP00000019636 | ENSPPYP00000015683 | PMS2 isoform 6. | MLH1 isoform 1. | 0.996 |
CR201_G0053891 | MLH3 | ENSPPYP00000019636 | ENSPPYP00000006818 | PMS2 isoform 6. | MLH3 isoform 1. | 0.744 |
CR201_G0053891 | MSH2 | ENSPPYP00000019636 | ENSPPYP00000013876 | PMS2 isoform 6. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.965 |
CR201_G0053891 | MSH3 | ENSPPYP00000019636 | ENSPPYP00000017440 | PMS2 isoform 6. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.956 |
CR201_G0053891 | MSH5 | ENSPPYP00000019636 | ENSPPYP00000018401 | PMS2 isoform 6. | MSH5 isoform 1. | 0.876 |
CR201_G0053891 | MSH6 | ENSPPYP00000019636 | ENSPPYP00000013873 | PMS2 isoform 6. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.965 |
CR201_G0053891 | PMS1 | ENSPPYP00000019636 | ENSPPYP00000014543 | PMS2 isoform 6. | PMS1 isoform 2. | 0.781 |
CR201_G0053891 | POLD1 | ENSPPYP00000019636 | ENSPPYP00000011511 | PMS2 isoform 6. | DNA polymerase delta catalytic subunit. | 0.764 |
EXO1 | CR201_G0053891 | ENSPPYP00000000064 | ENSPPYP00000019636 | EXO1 isoform 1. | PMS2 isoform 6. | 0.877 |
EXO1 | MLH1 | ENSPPYP00000000064 | ENSPPYP00000015683 | EXO1 isoform 1. | MLH1 isoform 1. | 0.994 |
EXO1 | MLH3 | ENSPPYP00000000064 | ENSPPYP00000006818 | EXO1 isoform 1. | MLH3 isoform 1. | 0.901 |
EXO1 | MSH2 | ENSPPYP00000000064 | ENSPPYP00000013876 | EXO1 isoform 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.991 |
EXO1 | MSH3 | ENSPPYP00000000064 | ENSPPYP00000017440 | EXO1 isoform 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.850 |
EXO1 | MSH5 | ENSPPYP00000000064 | ENSPPYP00000018401 | EXO1 isoform 1. | MSH5 isoform 1. | 0.708 |
EXO1 | MSH6 | ENSPPYP00000000064 | ENSPPYP00000013873 | EXO1 isoform 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.979 |
EXO1 | PMS1 | ENSPPYP00000000064 | ENSPPYP00000014543 | EXO1 isoform 1. | PMS1 isoform 2. | 0.897 |
EXO1 | POLD1 | ENSPPYP00000000064 | ENSPPYP00000011511 | EXO1 isoform 1. | DNA polymerase delta catalytic subunit. | 0.861 |
FAN1 | CR201_G0053891 | ENSPPYP00000007127 | ENSPPYP00000019636 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | PMS2 isoform 6. | 0.716 |
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