Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDC40 | CR201_G0006690 | ENSPPYP00000018941 | ENSPPYP00000023142 | CDC40 isoform 1. | UPF3B isoform 4. | 0.889 |
CDC40 | CWC22 | ENSPPYP00000018941 | ENSPPYP00000014506 | CDC40 isoform 1. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay. | 0.990 |
CDC40 | CWC25 | ENSPPYP00000018941 | ENSPPYP00000009555 | CDC40 isoform 1. | CWC25 spliceosome associated protein homolog. | 0.968 |
CDC40 | DHX38 | ENSPPYP00000018941 | ENSPPYP00000008486 | CDC40 isoform 1. | DHX38 isoform 1. | 0.997 |
CDC40 | PPIG | ENSPPYP00000018941 | ENSPPYP00000014414 | CDC40 isoform 1. | PPIG isoform 1. | 0.973 |
CDC40 | PPIL1 | ENSPPYP00000018941 | ENSPPYP00000018515 | CDC40 isoform 1. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.992 |
CDC40 | PPWD1 | ENSPPYP00000018941 | ENSPPYP00000017328 | CDC40 isoform 1. | Peptidylprolyl isomerase domain and WD repeat-containing protein 1; PPIase that catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides and may therefore assist protein folding. May be involved in pre-mRNA splicing. | 0.976 |
CDC40 | SYF2 | ENSPPYP00000018941 | ENSPPYP00000001980 | CDC40 isoform 1. | SYF2 pre-mRNA splicing factor. | 0.991 |
CDC40 | WDR70 | ENSPPYP00000018941 | ENSPPYP00000017214 | CDC40 isoform 1. | WD repeat domain 70. | 0.915 |
CDC40 | YJU2 | ENSPPYP00000018941 | ENSPPYP00000010540 | CDC40 isoform 1. | CCDC94 isoform 1. | 0.968 |
CR201_G0006690 | CDC40 | ENSPPYP00000023142 | ENSPPYP00000018941 | UPF3B isoform 4. | CDC40 isoform 1. | 0.889 |
CR201_G0006690 | CWC22 | ENSPPYP00000023142 | ENSPPYP00000014506 | UPF3B isoform 4. | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay. | 0.915 |
CR201_G0006690 | CWC25 | ENSPPYP00000023142 | ENSPPYP00000009555 | UPF3B isoform 4. | CWC25 spliceosome associated protein homolog. | 0.507 |
CR201_G0006690 | DHX38 | ENSPPYP00000023142 | ENSPPYP00000008486 | UPF3B isoform 4. | DHX38 isoform 1. | 0.893 |
CR201_G0006690 | PPIG | ENSPPYP00000023142 | ENSPPYP00000014414 | UPF3B isoform 4. | PPIG isoform 1. | 0.908 |
CR201_G0006690 | PPIL1 | ENSPPYP00000023142 | ENSPPYP00000018515 | UPF3B isoform 4. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.888 |
CR201_G0006690 | PPWD1 | ENSPPYP00000023142 | ENSPPYP00000017328 | UPF3B isoform 4. | Peptidylprolyl isomerase domain and WD repeat-containing protein 1; PPIase that catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides and may therefore assist protein folding. May be involved in pre-mRNA splicing. | 0.898 |
CWC22 | CDC40 | ENSPPYP00000014506 | ENSPPYP00000018941 | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay. | CDC40 isoform 1. | 0.990 |
CWC22 | CR201_G0006690 | ENSPPYP00000014506 | ENSPPYP00000023142 | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay. | UPF3B isoform 4. | 0.915 |
CWC22 | CWC25 | ENSPPYP00000014506 | ENSPPYP00000009555 | Pre-mRNA-splicing factor CWC22 homolog; Required for pre-mRNA splicing as component of the spliceosome. Promotes exon-junction complex (EJC) assembly. Hinders EIF4A3 from non-specifically binding RNA and escorts it to the splicing machinery to promote EJC assembly on mature mRNAs. Through its role in EJC assembly, required for nonsense-mediated mRNA decay. | CWC25 spliceosome associated protein homolog. | 0.955 |
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