Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGXT | DMGDH | ENSPPYP00000014927 | ENSPPYP00000017421 | Serine--pyruvate aminotransferase. | DMGDH isoform 5. | 0.539 |
AGXT | GART | ENSPPYP00000014927 | ENSPPYP00000012701 | Serine--pyruvate aminotransferase. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.831 |
AGXT | PHGDH | ENSPPYP00000014927 | ENSPPYP00000001120 | Serine--pyruvate aminotransferase. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate and the reversible oxidation of (S)-malate to oxaloacetate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.752 |
AGXT | PSAT1 | ENSPPYP00000014927 | ENSPPYP00000021636 | Serine--pyruvate aminotransferase. | Phosphoserine aminotransferase. | 0.450 |
AGXT | PSPH | ENSPPYP00000014927 | ENSPPYP00000019666 | Serine--pyruvate aminotransferase. | Phosphoserine phosphatase; Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates (By similarity); Belongs to the HAD-like hydrolase superfamily. SerB family. | 0.725 |
AGXT | SHMT1 | ENSPPYP00000014927 | ENSPPYP00000009057 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. | 0.850 |
AGXT | SHMT2 | ENSPPYP00000014927 | ENSPPYP00000005336 | Serine--pyruvate aminotransferase. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.808 |
DMGDH | AGXT | ENSPPYP00000017421 | ENSPPYP00000014927 | DMGDH isoform 5. | Serine--pyruvate aminotransferase. | 0.539 |
DMGDH | GART | ENSPPYP00000017421 | ENSPPYP00000012701 | DMGDH isoform 5. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.653 |
DMGDH | MTHFD1L | ENSPPYP00000017421 | ENSPPYP00000019152 | DMGDH isoform 5. | MTHFD1L isoform 1. | 0.517 |
DMGDH | PHGDH | ENSPPYP00000017421 | ENSPPYP00000001120 | DMGDH isoform 5. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate and the reversible oxidation of (S)-malate to oxaloacetate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.739 |
DMGDH | PSAT1 | ENSPPYP00000017421 | ENSPPYP00000021636 | DMGDH isoform 5. | Phosphoserine aminotransferase. | 0.668 |
DMGDH | PSPH | ENSPPYP00000017421 | ENSPPYP00000019666 | DMGDH isoform 5. | Phosphoserine phosphatase; Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates (By similarity); Belongs to the HAD-like hydrolase superfamily. SerB family. | 0.618 |
DMGDH | SHMT1 | ENSPPYP00000017421 | ENSPPYP00000009057 | DMGDH isoform 5. | Serine hydroxymethyltransferase, cytosolic; Interconversion of serine and glycine. | 0.794 |
DMGDH | SHMT2 | ENSPPYP00000017421 | ENSPPYP00000005336 | DMGDH isoform 5. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.721 |
GART | AGXT | ENSPPYP00000012701 | ENSPPYP00000014927 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Serine--pyruvate aminotransferase. | 0.831 |
GART | DMGDH | ENSPPYP00000012701 | ENSPPYP00000017421 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | DMGDH isoform 5. | 0.653 |
GART | MTHFD1L | ENSPPYP00000012701 | ENSPPYP00000019152 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | MTHFD1L isoform 1. | 0.999 |
GART | PSAT1 | ENSPPYP00000012701 | ENSPPYP00000021636 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Phosphoserine aminotransferase. | 0.658 |
GART | PSPH | ENSPPYP00000012701 | ENSPPYP00000019666 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Phosphoserine phosphatase; Catalyzes the last step in the biosynthesis of serine from carbohydrates. The reaction mechanism proceeds via the formation of a phosphoryl-enzyme intermediates (By similarity); Belongs to the HAD-like hydrolase superfamily. SerB family. | 0.706 |
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