STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4DSEMA4D isoform 10; Belongs to the semaphorin family. (862 aa)    
Predicted Functional Partners:
PLXNB2
PLXNB2 isoform 4.
    
 0.996
PLXNB1
PLXNB1 isoform 1.
    
 0.993
CD72
CD72 isoform 2.
    
 0.992
PLXNB3
PLXNB3 isoform 1.
    
 0.987
PTPRC
PTPRC isoform 2.
    
 0.948
SEMA4G
SEMA4G isoform 7; Belongs to the semaphorin family.
     
0.905
SEMA4B
SEMA4B isoform 4.
     
0.901
PLXNA2
PLXNA2 isoform 1.
    
 0.855
PLXNC1
PLXNC1 isoform 1.
    
 0.850
RND1
Rho family GTPase 1.
    
 0.835
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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