STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARHL1BARHL1 isoform 1. (172 aa)    
Predicted Functional Partners:
ATOH1
Atonal bHLH transcription factor 1.
   
  
 0.761
LHX9
LHX9 isoform 1.
   
 
 0.679
LHX5
LHX5 isoform 2.
   
 
 0.677
ISL2
ISL LIM homeobox 2.
   
 
 0.654
IRX3
IRX3 isoform 1.
   
 
 0.581
ISL1
ISL1 isoform 1.
   
 
 0.561
VPS45
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.455
POU4F3
POU domain protein.
   
  
 0.444
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
  
 0.417
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.