Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DTNA | MAGEE1 | ENSPPYP00000010217 | ENSPPYP00000022933 | Dystrobrevin. | MAGEE1 isoform 1. | 0.543 |
DTNA | SNTA1 | ENSPPYP00000010217 | ENSPPYP00000012200 | Dystrobrevin. | SNTA1 isoform 1. | 0.877 |
EID2B | MAGEE1 | ENSPPYP00000011165 | ENSPPYP00000022933 | EP300 interacting inhibitor of differentiation 2B. | MAGEE1 isoform 1. | 0.698 |
MAGEE1 | DTNA | ENSPPYP00000022933 | ENSPPYP00000010217 | MAGEE1 isoform 1. | Dystrobrevin. | 0.543 |
MAGEE1 | EID2B | ENSPPYP00000022933 | ENSPPYP00000011165 | MAGEE1 isoform 1. | EP300 interacting inhibitor of differentiation 2B. | 0.698 |
MAGEE1 | NPAS4 | ENSPPYP00000022933 | ENSPPYP00000003503 | MAGEE1 isoform 1. | Neuronal PAS domain protein 4. | 0.445 |
MAGEE1 | NSMCE1 | ENSPPYP00000022933 | ENSPPYP00000008152 | MAGEE1 isoform 1. | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | 0.748 |
MAGEE1 | NSMCE2 | ENSPPYP00000022933 | ENSPPYP00000021177 | MAGEE1 isoform 1. | NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. | 0.744 |
MAGEE1 | NSMCE4A | ENSPPYP00000022933 | ENSPPYP00000003168 | MAGEE1 isoform 1. | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | 0.732 |
MAGEE1 | SMC3 | ENSPPYP00000022933 | ENSPPYP00000003081 | MAGEE1 isoform 1. | Structural maintenance of chromosomes protein 3; Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity); Belongs to the SMC family. SMC3 [...] | 0.465 |
MAGEE1 | SMC5 | ENSPPYP00000022933 | ENSPPYP00000021594 | MAGEE1 isoform 1. | SMC5 isoform 1. | 0.730 |
MAGEE1 | SMC6 | ENSPPYP00000022933 | ENSPPYP00000014101 | MAGEE1 isoform 1. | Structural maintenance of chromosomes 6. | 0.758 |
MAGEE1 | SNTA1 | ENSPPYP00000022933 | ENSPPYP00000012200 | MAGEE1 isoform 1. | SNTA1 isoform 1. | 0.484 |
NPAS4 | MAGEE1 | ENSPPYP00000003503 | ENSPPYP00000022933 | Neuronal PAS domain protein 4. | MAGEE1 isoform 1. | 0.445 |
NSMCE1 | MAGEE1 | ENSPPYP00000008152 | ENSPPYP00000022933 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | MAGEE1 isoform 1. | 0.748 |
NSMCE1 | NSMCE2 | ENSPPYP00000008152 | ENSPPYP00000021177 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. | 0.999 |
NSMCE1 | NSMCE4A | ENSPPYP00000008152 | ENSPPYP00000003168 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. | 0.991 |
NSMCE1 | SMC3 | ENSPPYP00000008152 | ENSPPYP00000003081 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | Structural maintenance of chromosomes protein 3; Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity); Belongs to the SMC family. SMC3 [...] | 0.805 |
NSMCE1 | SMC5 | ENSPPYP00000008152 | ENSPPYP00000021594 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | SMC5 isoform 1. | 0.994 |
NSMCE1 | SMC6 | ENSPPYP00000008152 | ENSPPYP00000014101 | Non-structural maintenance of chromosomes element 1 homolog; RING-type zinc finger-containing E3 ubiquitin ligase that assembles with melanoma antigen protein (MAGE) to catalyze the direct transfer of ubiquitin from E2 ubiquitin-conjugating enzyme to a specific substrate. Within MAGE-RING ubiquitin ligase complex, MAGE stimulates and specifies ubiquitin ligase activity likely through recruitment and/or stabilization of the E2 ubiquitin-conjugating enzyme at the E3:substrate complex. Involved in maintenance of genome integrity, DNA damage response and DNA repair. NSMCE3/MAGEG1 and NSMCE [...] | Structural maintenance of chromosomes 6. | 0.999 |
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