Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DEFB130A | DEFB135 | ENSP00000382951 | ENSP00000371643 | Beta-defensin 130A; Antimicrobial host-defense peptide. Has an antiplasmodial activity. | Beta-defensin 135; Has antibacterial activity; Belongs to the beta-defensin family. | 0.734 |
DEFB130A | ZNF705D | ENSP00000382951 | ENSP00000382957 | Beta-defensin 130A; Antimicrobial host-defense peptide. Has an antiplasmodial activity. | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.593 |
DEFB135 | DEFB130A | ENSP00000371643 | ENSP00000382951 | Beta-defensin 135; Has antibacterial activity; Belongs to the beta-defensin family. | Beta-defensin 130A; Antimicrobial host-defense peptide. Has an antiplasmodial activity. | 0.734 |
DEFB135 | ZNF705D | ENSP00000371643 | ENSP00000382957 | Beta-defensin 135; Has antibacterial activity; Belongs to the beta-defensin family. | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.654 |
FAM86B2 | ZNF705D | ENSP00000262365 | ENSP00000382957 | Putative protein N-methyltransferase FAM86B2; Family with sequence similarity 86 member B2. | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.480 |
KCNA10 | ZNF705D | ENSP00000358786 | ENSP00000382957 | Potassium voltage-gated channel subfamily A member 10; Mediates voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. The channel activity is up-regulated by cAMP; Belongs to the potassium channel family. A (Shaker) (TC 1.A.1.2) subfamily. Kv1.8/KCNA10 sub-subfamily. | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.446 |
TRIM28 | ZNF705D | ENSP00000253024 | ENSP00000382957 | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.522 |
ZNF705D | DEFB130A | ENSP00000382957 | ENSP00000382951 | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Beta-defensin 130A; Antimicrobial host-defense peptide. Has an antiplasmodial activity. | 0.593 |
ZNF705D | DEFB135 | ENSP00000382957 | ENSP00000371643 | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Beta-defensin 135; Has antibacterial activity; Belongs to the beta-defensin family. | 0.654 |
ZNF705D | FAM86B2 | ENSP00000382957 | ENSP00000262365 | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Putative protein N-methyltransferase FAM86B2; Family with sequence similarity 86 member B2. | 0.480 |
ZNF705D | KCNA10 | ENSP00000382957 | ENSP00000358786 | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Potassium voltage-gated channel subfamily A member 10; Mediates voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. The channel activity is up-regulated by cAMP; Belongs to the potassium channel family. A (Shaker) (TC 1.A.1.2) subfamily. Kv1.8/KCNA10 sub-subfamily. | 0.446 |
ZNF705D | TRIM28 | ENSP00000382957 | ENSP00000253024 | Zinc finger protein 705D; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | 0.522 |