Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FANK1 | POLI | ENSCAFP00000033959 | ENSCAFP00000000218 | Fibronectin type III and ankyrin repeat domains 1. | DNA polymerase iota. | 0.437 |
FANK1 | TAF1B | ENSCAFP00000033959 | ENSCAFP00000005032 | Fibronectin type III and ankyrin repeat domains 1. | TATA-box binding protein associated factor, RNA polymerase I subunit B. | 0.870 |
FANK1 | ZNF274 | ENSCAFP00000033959 | ENSCAFP00000003443 | Fibronectin type III and ankyrin repeat domains 1. | Zinc finger protein 274. | 0.799 |
POLI | FANK1 | ENSCAFP00000000218 | ENSCAFP00000033959 | DNA polymerase iota. | Fibronectin type III and ankyrin repeat domains 1. | 0.437 |
POLI | POLR1B | ENSCAFP00000000218 | ENSCAFP00000010651 | DNA polymerase iota. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.511 |
POLI | TAF1A | ENSCAFP00000000218 | ENSCAFP00000020048 | DNA polymerase iota. | TATA-box binding protein associated factor, RNA polymerase I subunit A. | 0.500 |
POLI | TAF1B | ENSCAFP00000000218 | ENSCAFP00000005032 | DNA polymerase iota. | TATA-box binding protein associated factor, RNA polymerase I subunit B. | 0.763 |
POLI | TAF1D | ENSCAFP00000000218 | ENSCAFP00000019984 | DNA polymerase iota. | Uncharacterized protein. | 0.612 |
POLI | TBP | ENSCAFP00000000218 | ENSCAFP00000065523 | DNA polymerase iota. | TATA-box binding protein. | 0.456 |
POLI | UBTF | ENSCAFP00000000218 | ENSCAFP00000021044 | DNA polymerase iota. | Upstream binding transcription factor. | 0.623 |
POLR1B | POLI | ENSCAFP00000010651 | ENSCAFP00000000218 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA polymerase iota. | 0.511 |
POLR1B | TAF1A | ENSCAFP00000010651 | ENSCAFP00000020048 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein associated factor, RNA polymerase I subunit A. | 0.743 |
POLR1B | TAF1B | ENSCAFP00000010651 | ENSCAFP00000005032 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein associated factor, RNA polymerase I subunit B. | 0.690 |
POLR1B | TAF1C | ENSCAFP00000010651 | ENSCAFP00000066786 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein associated factor, RNA polymerase I subunit C. | 0.724 |
POLR1B | TAF1D | ENSCAFP00000010651 | ENSCAFP00000019984 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.665 |
POLR1B | TBP | ENSCAFP00000010651 | ENSCAFP00000065523 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein. | 0.796 |
POLR1B | TWISTNB | ENSCAFP00000010651 | ENSCAFP00000003662 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TWIST neighbor. | 0.998 |
POLR1B | UBTF | ENSCAFP00000010651 | ENSCAFP00000021044 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Upstream binding transcription factor. | 0.774 |
TAF1A | POLI | ENSCAFP00000020048 | ENSCAFP00000000218 | TATA-box binding protein associated factor, RNA polymerase I subunit A. | DNA polymerase iota. | 0.500 |
TAF1A | POLR1B | ENSCAFP00000020048 | ENSCAFP00000010651 | TATA-box binding protein associated factor, RNA polymerase I subunit A. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.743 |
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