STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VOPP1VOPP1 WW domain binding protein. (280 aa)    
Predicted Functional Partners:
GRK5
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
      
 0.807
TMEM207
Transmembrane protein 207.
      
 0.780
ARMCX5
Armadillo repeat containing X-linked 5.
      
 0.669
LY96
Lymphocyte antigen 96.
      
 0.570
VGF
VGF nerve growth factor inducible.
      
 0.560
EYA3
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.518
ZSCAN29
Zinc finger and SCAN domain containing 29.
      
 0.517
MRPL18
Mitochondrial ribosomal protein L18.
      
 0.515
PSMA2
Proteasome subunit alpha type.
      
 0.514
STK17A
Serine/threonine kinase 17a.
      
 0.511
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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