STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HBP1HMG-box transcription factor 1. (529 aa)    
Predicted Functional Partners:
C7H1orf105
Uncharacterized protein.
      
 0.806
MTIF2
Mitochondrial translational initiation factor 2.
   
  
 0.789
RNF11
Ring finger protein 11.
   
  
 0.698
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
      
 0.671
PTPN9
SIN3 transcription regulator family member A.
   
 
 0.654
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.617
GID8
GID complex subunit 8 homolog.
    
 
 0.589
DUS4L
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
      
 0.517
ANKRD10
Ankyrin repeat domain 10.
   
 
 0.515
CDS2
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
      
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.