Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPSF1 | DCLRE1C | ENSCAFP00000040297 | ENSCAFP00000057589 | Cleavage and polyadenylation specific factor 1. | DNA cross-link repair 1C. | 0.688 |
CPSF1 | SYMPK | ENSCAFP00000040297 | ENSCAFP00000006517 | Cleavage and polyadenylation specific factor 1. | Symplekin. | 0.998 |
DCLRE1C | CPSF1 | ENSCAFP00000057589 | ENSCAFP00000040297 | DNA cross-link repair 1C. | Cleavage and polyadenylation specific factor 1. | 0.688 |
DCLRE1C | LIG4 | ENSCAFP00000057589 | ENSCAFP00000009027 | DNA cross-link repair 1C. | DNA ligase. | 0.929 |
DCLRE1C | MRE11 | ENSCAFP00000057589 | ENSCAFP00000006193 | DNA cross-link repair 1C. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.801 |
DCLRE1C | NHEJ1 | ENSCAFP00000057589 | ENSCAFP00000039487 | DNA cross-link repair 1C. | Non-homologous end joining factor 1. | 0.769 |
DCLRE1C | PRKDC | ENSCAFP00000057589 | ENSCAFP00000009842 | DNA cross-link repair 1C. | DNA-dependent protein kinase catalytic subunit; Serine/threonine-protein kinase that acts as a molecular sensor for DNA damage. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break (DSB) repair and V(D)J recombination. Must be bound to DNA to express its catalytic properties. Promotes processing of hairpin DNA structures in V(D)J recombination by activation of the hairpin endonuclease artemis (DCLRE1C). The assembly of the DNA-PK complex at DNA ends is also required for the NHEJ ligation step. Required to protect and align broken ends of DNA. May also act [...] | 0.979 |
DCLRE1C | RAG2 | ENSCAFP00000057589 | ENSCAFP00000010147 | DNA cross-link repair 1C. | Recombination activating 2. | 0.655 |
DCLRE1C | SYMPK | ENSCAFP00000057589 | ENSCAFP00000006517 | DNA cross-link repair 1C. | Symplekin. | 0.656 |
DCLRE1C | UIMC1 | ENSCAFP00000057589 | ENSCAFP00000024343 | DNA cross-link repair 1C. | Ubiquitin interaction motif containing 1. | 0.669 |
DCLRE1C | XRCC5 | ENSCAFP00000057589 | ENSCAFP00000038467 | DNA cross-link repair 1C. | X-ray repair cross complementing 5. | 0.970 |
DCLRE1C | XRCC6 | ENSCAFP00000057589 | ENSCAFP00000058107 | DNA cross-link repair 1C. | X-ray repair cross complementing 6. | 0.953 |
LIG4 | DCLRE1C | ENSCAFP00000009027 | ENSCAFP00000057589 | DNA ligase. | DNA cross-link repair 1C. | 0.929 |
LIG4 | MRE11 | ENSCAFP00000009027 | ENSCAFP00000006193 | DNA ligase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.713 |
LIG4 | NHEJ1 | ENSCAFP00000009027 | ENSCAFP00000039487 | DNA ligase. | Non-homologous end joining factor 1. | 0.987 |
LIG4 | PRKDC | ENSCAFP00000009027 | ENSCAFP00000009842 | DNA ligase. | DNA-dependent protein kinase catalytic subunit; Serine/threonine-protein kinase that acts as a molecular sensor for DNA damage. Involved in DNA non-homologous end joining (NHEJ) required for double-strand break (DSB) repair and V(D)J recombination. Must be bound to DNA to express its catalytic properties. Promotes processing of hairpin DNA structures in V(D)J recombination by activation of the hairpin endonuclease artemis (DCLRE1C). The assembly of the DNA-PK complex at DNA ends is also required for the NHEJ ligation step. Required to protect and align broken ends of DNA. May also act [...] | 0.963 |
LIG4 | RAG2 | ENSCAFP00000009027 | ENSCAFP00000010147 | DNA ligase. | Recombination activating 2. | 0.453 |
LIG4 | XRCC5 | ENSCAFP00000009027 | ENSCAFP00000038467 | DNA ligase. | X-ray repair cross complementing 5. | 0.985 |
LIG4 | XRCC6 | ENSCAFP00000009027 | ENSCAFP00000058107 | DNA ligase. | X-ray repair cross complementing 6. | 0.989 |
MRE11 | DCLRE1C | ENSCAFP00000006193 | ENSCAFP00000057589 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | DNA cross-link repair 1C. | 0.801 |
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