Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCAFP00000054759 | ENSCAFP00000061156 | ENSCAFP00000054759 | ENSCAFP00000061156 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.913 |
ENSCAFP00000054759 | FAU | ENSCAFP00000054759 | ENSCAFP00000033982 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.912 |
ENSCAFP00000054759 | RPL13A | ENSCAFP00000054759 | ENSCAFP00000005417 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppres [...] | 0.996 |
ENSCAFP00000054759 | RPL15 | ENSCAFP00000054759 | ENSCAFP00000008630 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.998 |
ENSCAFP00000054759 | RPL19 | ENSCAFP00000054759 | ENSCAFP00000024264 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L19. | 0.999 |
ENSCAFP00000054759 | RPL24 | ENSCAFP00000054759 | ENSCAFP00000014113 | Ubiquitin-like domain-containing protein. | Ribosomal protein L24. | 0.998 |
ENSCAFP00000054759 | RPL8 | ENSCAFP00000054759 | ENSCAFP00000002440 | Ubiquitin-like domain-containing protein. | Ribosomal protein L8. | 0.997 |
ENSCAFP00000054759 | RPS18 | ENSCAFP00000054759 | ENSCAFP00000061231 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
ENSCAFP00000054759 | RPS3 | ENSCAFP00000054759 | ENSCAFP00000008052 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] | 0.996 |
ENSCAFP00000054759 | RPS5 | ENSCAFP00000054759 | ENSCAFP00000003434 | Ubiquitin-like domain-containing protein. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.995 |
ENSCAFP00000061156 | ENSCAFP00000054759 | ENSCAFP00000061156 | ENSCAFP00000054759 | Ubiquitin-like domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.913 |
ENSCAFP00000061156 | FAU | ENSCAFP00000061156 | ENSCAFP00000033982 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.909 |
ENSCAFP00000061156 | RPL13A | ENSCAFP00000061156 | ENSCAFP00000005417 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L13a; Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppres [...] | 0.996 |
ENSCAFP00000061156 | RPL15 | ENSCAFP00000061156 | ENSCAFP00000008630 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.998 |
ENSCAFP00000061156 | RPL19 | ENSCAFP00000061156 | ENSCAFP00000024264 | Ubiquitin-like domain-containing protein. | 60S ribosomal protein L19. | 0.999 |
ENSCAFP00000061156 | RPL24 | ENSCAFP00000061156 | ENSCAFP00000014113 | Ubiquitin-like domain-containing protein. | Ribosomal protein L24. | 0.998 |
ENSCAFP00000061156 | RPL8 | ENSCAFP00000061156 | ENSCAFP00000002440 | Ubiquitin-like domain-containing protein. | Ribosomal protein L8. | 0.997 |
ENSCAFP00000061156 | RPS18 | ENSCAFP00000061156 | ENSCAFP00000061231 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
ENSCAFP00000061156 | RPS3 | ENSCAFP00000061156 | ENSCAFP00000008052 | Ubiquitin-like domain-containing protein. | 40S ribosomal protein S3; Involved in translation as a component of the 40S small ribosomal subunit. Has endonuclease activity and plays a role in repair of damaged DNA. Cleaves phosphodiester bonds of DNAs containing altered bases with broad specificity and cleaves supercoiled DNA more efficiently than relaxed DNA. Displays high binding affinity for 7,8- dihydro-8-oxoguanine (8-oxoG), a common DNA lesion caused by reactive oxygen species (ROS). Has also been shown to bind with similar affinity to intact and damaged DNA. Stimulates the N-glycosylase activity of the base excision protei [...] | 0.996 |
ENSCAFP00000061156 | RPS5 | ENSCAFP00000061156 | ENSCAFP00000003434 | Ubiquitin-like domain-containing protein. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. | 0.995 |
page 1 of 6