PRPF40A protein (Canis lupus familiaris) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

PRPF40A

Pre-mRNA processing factor 40 homolog A. (994 aa)

Predicted Functional Partners:

RBM25

0.959

RBM39

0.899

SRRM1

0.897

SF1

0.893

TCERG1

0.879

NIF3L1

0.867

KLHL30

0.863

MTREX

0.859

DDX5

0.849

DHX9

0.840

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX5	DHX9	ENSCAFP00000017225	ENSCAFP00000019476	Uncharacterized protein; Belongs to the DEAD box helicase family.	DExH-box helicase 9.	0.969
DDX5	MTREX	ENSCAFP00000017225	ENSCAFP00000010181	Uncharacterized protein; Belongs to the DEAD box helicase family.	Mtr4 exosome RNA helicase.	0.888
DDX5	PRPF40A	ENSCAFP00000017225	ENSCAFP00000040597	Uncharacterized protein; Belongs to the DEAD box helicase family.	Pre-mRNA processing factor 40 homolog A.	0.849
DDX5	RBM25	ENSCAFP00000017225	ENSCAFP00000032653	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA binding motif protein 25.	0.853
DDX5	RBM39	ENSCAFP00000017225	ENSCAFP00000012254	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA binding motif protein 39.	0.924
DDX5	SF1	ENSCAFP00000017225	ENSCAFP00000055529	Uncharacterized protein; Belongs to the DEAD box helicase family.	Splicing factor 1.	0.869
DDX5	SRRM1	ENSCAFP00000017225	ENSCAFP00000019053	Uncharacterized protein; Belongs to the DEAD box helicase family.	PWI domain-containing protein.	0.836
DDX5	TCERG1	ENSCAFP00000017225	ENSCAFP00000035829	Uncharacterized protein; Belongs to the DEAD box helicase family.	Transcription elongation regulator 1.	0.838
DHX9	DDX5	ENSCAFP00000019476	ENSCAFP00000017225	DExH-box helicase 9.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.969
DHX9	MTREX	ENSCAFP00000019476	ENSCAFP00000010181	DExH-box helicase 9.	Mtr4 exosome RNA helicase.	0.837
DHX9	PRPF40A	ENSCAFP00000019476	ENSCAFP00000040597	DExH-box helicase 9.	Pre-mRNA processing factor 40 homolog A.	0.840
DHX9	RBM25	ENSCAFP00000019476	ENSCAFP00000032653	DExH-box helicase 9.	RNA binding motif protein 25.	0.832
DHX9	RBM39	ENSCAFP00000019476	ENSCAFP00000012254	DExH-box helicase 9.	RNA binding motif protein 39.	0.851
DHX9	SF1	ENSCAFP00000019476	ENSCAFP00000055529	DExH-box helicase 9.	Splicing factor 1.	0.834
DHX9	SRRM1	ENSCAFP00000019476	ENSCAFP00000019053	DExH-box helicase 9.	PWI domain-containing protein.	0.874
DHX9	TCERG1	ENSCAFP00000019476	ENSCAFP00000035829	DExH-box helicase 9.	Transcription elongation regulator 1.	0.830
KLHL30	NIF3L1	ENSCAFP00000018244	ENSCAFP00000017675	Kelch like family member 30.	NIF3-like protein 1; May function as a transcriptional corepressor through its interaction with COPS2, negatively regulating the expression of genes involved in neuronal differentiation.	0.861
KLHL30	PRPF40A	ENSCAFP00000018244	ENSCAFP00000040597	Kelch like family member 30.	Pre-mRNA processing factor 40 homolog A.	0.863
MTREX	DDX5	ENSCAFP00000010181	ENSCAFP00000017225	Mtr4 exosome RNA helicase.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.888
MTREX	DHX9	ENSCAFP00000010181	ENSCAFP00000019476	Mtr4 exosome RNA helicase.	DExH-box helicase 9.	0.837