STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEPH1Ventricular zone expressed PH domain containing 1. (858 aa)    
Predicted Functional Partners:
CCDC117
Coiled-coil domain containing 117.
      
 0.777
MEGF11
Multiple EGF like domains 11.
      
 0.721
LRRC4
Leucine rich repeat containing 4.
      
 0.707
SLC16A4
Solute carrier family 16 member 4.
   
  
 0.693
GYPC
Glycophorin C.
      
 0.681
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.662
PLSCR4
Phospholipid scramblase; May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. Belongs to the phospholipid scramblase family.
      
 0.642
PTAFR
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.636
PAFAH1B3
Platelet activating factor acetylhydrolase 1b catalytic subunit 3.
      
 0.566
CDH9
Cadherin 9; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.566
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.