Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACAN | COL2A1 | ENSCAFP00000065577 | ENSCAFP00000013330 | Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. | Collagen type II alpha 1 chain. | 0.953 |
ACAN | COMP | ENSCAFP00000065577 | ENSCAFP00000055935 | Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. | Cartilage oligomeric matrix protein. | 0.910 |
ACAN | PRG4 | ENSCAFP00000065577 | ENSCAFP00000020163 | Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. | Proteoglycan 4. | 0.609 |
COL2A1 | ACAN | ENSCAFP00000013330 | ENSCAFP00000065577 | Collagen type II alpha 1 chain. | Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. | 0.953 |
COL2A1 | COMP | ENSCAFP00000013330 | ENSCAFP00000055935 | Collagen type II alpha 1 chain. | Cartilage oligomeric matrix protein. | 0.807 |
COL2A1 | PRG4 | ENSCAFP00000013330 | ENSCAFP00000020163 | Collagen type II alpha 1 chain. | Proteoglycan 4. | 0.504 |
COMP | ACAN | ENSCAFP00000055935 | ENSCAFP00000065577 | Cartilage oligomeric matrix protein. | Aggrecan core protein; This proteoglycan is a major component of extracellular matrix of cartilagenous tissues. A major function of this protein is to resist compression in cartilage. It binds avidly to hyaluronic acid via an N-terminal globular region. May play a regulatory role in the matrix assembly of the cartilage. | 0.910 |
COMP | COL2A1 | ENSCAFP00000055935 | ENSCAFP00000013330 | Cartilage oligomeric matrix protein. | Collagen type II alpha 1 chain. | 0.807 |
COMP | PRG4 | ENSCAFP00000055935 | ENSCAFP00000020163 | Cartilage oligomeric matrix protein. | Proteoglycan 4. | 0.564 |
CSPG4 | PRG4 | ENSCAFP00000026679 | ENSCAFP00000020163 | Chondroitin sulfate proteoglycan 4. | Proteoglycan 4. | 0.638 |
FAM222B | OR2K2 | ENSCAFP00000035938 | ENSCAFP00000004426 | Family with sequence similarity 222 member B. | Olfactory receptor. | 0.697 |
FAM222B | PDZD9 | ENSCAFP00000035938 | ENSCAFP00000026186 | Family with sequence similarity 222 member B. | PDZ domain containing 9. | 0.698 |
FAM222B | PRG4 | ENSCAFP00000035938 | ENSCAFP00000020163 | Family with sequence similarity 222 member B. | Proteoglycan 4. | 0.517 |
FGFR1OP2 | PRG4 | ENSCAFP00000038728 | ENSCAFP00000020163 | FGFR1 oncogene partner 2. | Proteoglycan 4. | 0.563 |
FNDC3B | PRG4 | ENSCAFP00000051612 | ENSCAFP00000020163 | Fibronectin type III domain containing 3B. | Proteoglycan 4. | 0.504 |
LOC482202 | OR2K2 | ENSCAFP00000033114 | ENSCAFP00000004426 | Histone H2B; Belongs to the histone H2B family. | Olfactory receptor. | 0.647 |
LOC482202 | PRG4 | ENSCAFP00000033114 | ENSCAFP00000020163 | Histone H2B; Belongs to the histone H2B family. | Proteoglycan 4. | 0.468 |
OR2K2 | FAM222B | ENSCAFP00000004426 | ENSCAFP00000035938 | Olfactory receptor. | Family with sequence similarity 222 member B. | 0.697 |
OR2K2 | LOC482202 | ENSCAFP00000004426 | ENSCAFP00000033114 | Olfactory receptor. | Histone H2B; Belongs to the histone H2B family. | 0.647 |
OR2K2 | PDZD9 | ENSCAFP00000004426 | ENSCAFP00000026186 | Olfactory receptor. | PDZ domain containing 9. | 0.693 |
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