Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BGN | COL1A1 | ENSCAFP00000028297 | ENSCAFP00000025056 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | 0.874 |
BGN | COL1A2 | ENSCAFP00000028297 | ENSCAFP00000029400 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.823 |
BGN | COL3A1 | ENSCAFP00000028297 | ENSCAFP00000021825 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen type III alpha 1 chain. | 0.726 |
BGN | COL5A1 | ENSCAFP00000028297 | ENSCAFP00000029402 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen type V alpha 1 chain. | 0.584 |
BGN | COL5A2 | ENSCAFP00000028297 | ENSCAFP00000021860 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen type V alpha 2 chain. | 0.804 |
BGN | COL6A1 | ENSCAFP00000028297 | ENSCAFP00000041957 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Collagen type VI alpha 1 chain. | 0.679 |
BGN | FBN1 | ENSCAFP00000028297 | ENSCAFP00000021725 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Uncharacterized protein. | 0.654 |
BGN | PCOLCE | ENSCAFP00000028297 | ENSCAFP00000049022 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Procollagen C-endopeptidase enhancer. | 0.444 |
BGN | SERPINH1 | ENSCAFP00000028297 | ENSCAFP00000008031 | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | Serpin family H member 1; Belongs to the serpin family. | 0.543 |
COL1A1 | BGN | ENSCAFP00000025056 | ENSCAFP00000028297 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | 0.874 |
COL1A1 | COL1A2 | ENSCAFP00000025056 | ENSCAFP00000029400 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | 0.999 |
COL1A1 | COL3A1 | ENSCAFP00000025056 | ENSCAFP00000021825 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type III alpha 1 chain. | 0.996 |
COL1A1 | COL5A1 | ENSCAFP00000025056 | ENSCAFP00000029402 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type V alpha 1 chain. | 0.750 |
COL1A1 | COL5A2 | ENSCAFP00000025056 | ENSCAFP00000021860 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type V alpha 2 chain. | 0.952 |
COL1A1 | COL6A1 | ENSCAFP00000025056 | ENSCAFP00000041957 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Collagen type VI alpha 1 chain. | 0.896 |
COL1A1 | FBN1 | ENSCAFP00000025056 | ENSCAFP00000021725 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Uncharacterized protein. | 0.800 |
COL1A1 | PCOLCE | ENSCAFP00000025056 | ENSCAFP00000049022 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Procollagen C-endopeptidase enhancer. | 0.774 |
COL1A1 | PLOD1 | ENSCAFP00000025056 | ENSCAFP00000024310 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Fe2OG dioxygenase domain-containing protein. | 0.730 |
COL1A1 | SERPINH1 | ENSCAFP00000025056 | ENSCAFP00000008031 | Collagen alpha-1(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen). | Serpin family H member 1; Belongs to the serpin family. | 0.854 |
COL1A2 | BGN | ENSCAFP00000029400 | ENSCAFP00000028297 | Collagen alpha-2(I) chain; Type I collagen is a member of group I collagen (fibrillar forming collagen); Belongs to the fibrillar collagen family. | Biglycan; May be involved in collagen fiber assembly; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily. | 0.823 |
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